Literature DB >> 20075246

Hungry codons promote frameshifting in human mitochondrial ribosomes.

Richard Temperley1, Ricarda Richter, Sven Dennerlein, Robert N Lightowlers, Zofia M Chrzanowska-Lightowlers.   

Abstract

Human mitochondria are not strict adherents to the universal genetic code, with modifications that include the apparent recoding of two arginine triplets to termination signals. This use of both AGA and AGG occurs rarely in other mammals, and this putative change has long posed a challenging conundrum. A -1 mitoribosome frameshift upstream of the rare codons would necessitate recognition of only the conventional UAA and UAG termination codons. By using a sequence-specific endoribonuclease, we show that the rare arginine codons, presumably in association with other cis elements, promote frameshifting in human mitoribosomes.

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Year:  2010        PMID: 20075246     DOI: 10.1126/science.1180674

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  67 in total

1.  Bioinformatic, structural, and functional analyses support release factor-like MTRF1 as a protein able to decode nonstandard stop codons beginning with adenine in vertebrate mitochondria.

Authors:  David J Young; Christina D Edgar; Jennifer Murphy; Johannes Fredebohm; Elizabeth S Poole; Warren P Tate
Journal:  RNA       Date:  2010-04-26       Impact factor: 4.942

2.  Mitochondrial genomes from modern horses reveal the major haplogroups that underwent domestication.

Authors:  Alessandro Achilli; Anna Olivieri; Pedro Soares; Hovirag Lancioni; Baharak Hooshiar Kashani; Ugo A Perego; Solomon G Nergadze; Valeria Carossa; Marco Santagostino; Stefano Capomaccio; Michela Felicetti; Walid Al-Achkar; M Cecilia T Penedo; Andrea Verini-Supplizi; Massoud Houshmand; Scott R Woodward; Ornella Semino; Maurizio Silvestrelli; Elena Giulotto; Luísa Pereira; Hans-Jürgen Bandelt; Antonio Torroni
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

Review 3.  Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.

Authors:  Pavel V Baranov; John F Atkins; Martina M Yordanova
Journal:  Nat Rev Genet       Date:  2015-08-11       Impact factor: 53.242

Review 4.  Structural aspects of translation termination on the ribosome.

Authors:  Andrei A Korostelev
Journal:  RNA       Date:  2011-06-23       Impact factor: 4.942

5.  Enteric virulence associated protein VapC inhibits translation by cleavage of initiator tRNA.

Authors:  Kristoffer S Winther; Kenn Gerdes
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-18       Impact factor: 11.205

Review 6.  How tRNAs dictate nuclear codon reassignments: Only a few can capture non-cognate codons.

Authors:  Martin Kollmar; Stefanie Mühlhausen
Journal:  RNA Biol       Date:  2017-01-17       Impact factor: 4.652

Review 7.  Mitochondrial ribosomes in cancer.

Authors:  Hyun-Jung Kim; Priyanka Maiti; Antoni Barrientos
Journal:  Semin Cancer Biol       Date:  2017-04-23       Impact factor: 15.707

8.  Mutations in C12orf65 in patients with encephalomyopathy and a mitochondrial translation defect.

Authors:  Hana Antonicka; Elsebet Ostergaard; Florin Sasarman; Woranontee Weraarpachai; Flemming Wibrand; Anne Marie B Pedersen; Richard J Rodenburg; Marjo S van der Knaap; Jan A M Smeitink; Zofia M Chrzanowska-Lightowlers; Eric A Shoubridge
Journal:  Am J Hum Genet       Date:  2010-07-09       Impact factor: 11.025

Review 9.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

10.  A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome.

Authors:  Ricarda Richter; Joanna Rorbach; Aleksandra Pajak; Paul M Smith; Hans J Wessels; Martijn A Huynen; Jan A Smeitink; Robert N Lightowlers; Zofia M Chrzanowska-Lightowlers
Journal:  EMBO J       Date:  2010-02-25       Impact factor: 11.598

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