Literature DB >> 20055478

Novel peptoid building blocks: synthesis of functionalized aromatic helix-inducing submonomers.

Jiwon Seo1, Annelise E Barron, Ronald N Zuckermann.   

Abstract

Peptoids, oligo-N-substituted glycines, can fold into well-defined helical secondary structures. The design and synthesis of new peptoid building blocks that are capable of both (a) inducing a helical secondary structure and (b) decorating the helices with chemical functionalities are reported. Peptoid heptamers containing carboxamide, carboxylic acid or thiol functionalities were synthesized, and the resulting peptoids were shown to form stable helices. A thiol-containing peptoid readily formed the homodisulfide, providing a convenient route to prepare peptoid helix homodimers.

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Year:  2010        PMID: 20055478      PMCID: PMC2814525          DOI: 10.1021/ol902660p

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  27 in total

1.  Peptoid oligomers with alpha-chiral, aromatic side chains: effects of chain length on secondary structure.

Authors:  C W Wu; T J Sanborn; R N Zuckermann; A E Barron
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

2.  Surfactant protein B: disulfide bridges, structural properties, and kringle similarities.

Authors:  J Johansson; T Curstedt; H Jörnvall
Journal:  Biochemistry       Date:  1991-07-16       Impact factor: 3.162

3.  Local and tunable n-->pi* interactions regulate amide isomerism in the peptoid backbone.

Authors:  Benjamin C Gorske; Brent L Bastian; Grant D Geske; Helen E Blackwell
Journal:  J Am Chem Soc       Date:  2007-07-03       Impact factor: 15.419

4.  Extreme stability of helices formed by water-soluble poly-N-substituted glycines (polypeptoids) with alpha-chiral side chains.

Authors:  Tracy J Sanborn; Cindy W Wu; Ronald N Zuckermann; Annelise E Barron
Journal:  Biopolymers       Date:  2002-01       Impact factor: 2.505

5.  Biomimetic nanostructures: creating a high-affinity zinc-binding site in a folded nonbiological polymer.

Authors:  Byoung-Chul Lee; Tammy K Chu; Ken A Dill; Ronald N Zuckermann
Journal:  J Am Chem Soc       Date:  2008-07-09       Impact factor: 15.419

6.  Sequence-specific polypeptoids: a diverse family of heteropolymers with stable secondary structure.

Authors:  K Kirshenbaum; A E Barron; R A Goldsmith; P Armand; E K Bradley; K T Truong; K A Dill; F E Cohen; R N Zuckermann
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

7.  Peptoids that mimic the structure, function, and mechanism of helical antimicrobial peptides.

Authors:  Nathaniel P Chongsiriwatana; James A Patch; Ann M Czyzewski; Michelle T Dohm; Andrey Ivankin; David Gidalevitz; Ronald N Zuckermann; Annelise E Barron
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-19       Impact factor: 11.205

8.  Non-peptide angiotensin II receptor antagonists: synthesis and biological activity of a series of novel 4,5-dihydro-4-oxo-3H-imidazo[4,5-c]pyridine derivatives.

Authors:  W W Mederski; D Dorsch; H H Bokel; N Beier; I Lues; P Schelling
Journal:  J Med Chem       Date:  1994-05-27       Impact factor: 7.446

9.  Conformational rearrangements by water-soluble peptoid foldamers.

Authors:  Sung Bin Y Shin; Kent Kirshenbaum
Journal:  Org Lett       Date:  2007-10-26       Impact factor: 6.005

10.  Structural and spectroscopic studies of peptoid oligomers with alpha-chiral aliphatic side chains.

Authors:  Cindy W Wu; Kent Kirshenbaum; Tracy J Sanborn; James A Patch; Kai Huang; Ken A Dill; Ronald N Zuckermann; Annelise E Barron
Journal:  J Am Chem Soc       Date:  2003-11-05       Impact factor: 15.419

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  5 in total

1.  Cyclization of peptoids by formation of boronate esters.

Authors:  Sara Chirayil; Kevin J Luebke
Journal:  Tetrahedron Lett       Date:  2011-12-08       Impact factor: 2.415

2.  Peptoid-based PET imaging of vascular endothelial growth factor receptor (VEGFR) expression.

Authors:  Guiyang Hao; Asghar Hajibeigi; Luis M De León-Rodríguez; Orhan K Oz; Xiankai Sun
Journal:  Am J Nucl Med Mol Imaging       Date:  2011-08-01

3.  Log D versus HPLC derived hydrophobicity: The development of predictive tools to aid in the rational design of bioactive peptoids.

Authors:  H L Bolt; C E J Williams; R V Brooks; R N Zuckermann; S L Cobb; E H C Bromley
Journal:  Biopolymers       Date:  2017-07       Impact factor: 2.505

Review 4.  Solid-phase synthesis of N-substituted glycine oligomers (alpha-peptoids) and derivatives.

Authors:  Adrian S Culf; Rodney J Ouellette
Journal:  Molecules       Date:  2010-08-04       Impact factor: 4.411

5.  A rotamer library to enable modeling and design of peptoid foldamers.

Authors:  P Douglas Renfrew; Timothy W Craven; Glenn L Butterfoss; Kent Kirshenbaum; Richard Bonneau
Journal:  J Am Chem Soc       Date:  2014-06-09       Impact factor: 15.419

  5 in total

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