Literature DB >> 20054229

Gene-gene interaction between APOA5 and USF1: two candidate genes for the metabolic syndrome.

Paula Singmann1, Jens Baumert, Christian Herder, Christa Meisinger, Christina Holzapfel, Norman Klopp, H-Erich Wichmann, Martin Klingenspor, Wolfgang Rathmann, Thomas Illig, Harald Grallert.   

Abstract

OBJECTIVE: The metabolic syndrome, a major cluster of risk factors for cardiovascular diseases, shows increasing prevalence worldwide. Several studies have established associations of both apolipoprotein A5 (APOA5) gene variants and upstream stimulatory factor 1 (USF1) gene variants with blood lipid levels and metabolic syndrome. USF1 is a transcription factor for APOA5.
METHODS: We investigated a possible interaction between these two genes on the risk for the metabolic syndrome, using data from the German population-based KORA survey 4 (1,622 men and women aged 55-74 years). Seven APOA5 single nucleotide polymorphisms (SNPs) were analyzed in combination with six USF1 SNPs, applying logistic regression in an additive model adjusting for age and sex and the definition for metabolic syndrome from the National Cholesterol Education Program's Adult Treatment Panel III (NCEP (AIII)) including medication.
RESULTS: The overall prevalence for metabolic syndrome was 41%. Two SNP combinations showed a nominal gene-gene interaction (p values 0.024 and 0.047). The effect of one SNP was modified by the other SNP, with a lower risk for the metabolic syndrome with odds ratios (ORs) between 0.33 (95% CI = 0.13-0.83) and 0.40 (95% CI = 0.15-1.12) when the other SNP was homozygous for the minor allele. Nevertheless, none of the associations remained significant after correction for multiple testing.
CONCLUSION: Thus, there is an indication of an interaction between APOA5 and USF1 on the risk for metabolic syndrome. Copyright 2009 S. Karger AG, Basel.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20054229      PMCID: PMC2919429          DOI: 10.1159/000227288

Source DB:  PubMed          Journal:  Obes Facts        ISSN: 1662-4025            Impact factor:   3.942


  26 in total

1.  Newly identified apolipoprotein AV gene predisposes to high plasma triglycerides in familial combined hyperlipidemia.

Authors:  Josep Ribalta; Lídia Figuera; Joan Fernández-Ballart; Elisabet Vilella; Manuel Castro Cabezas; Lluís Masana; Jorge Joven
Journal:  Clin Chem       Date:  2002-09       Impact factor: 8.327

Review 2.  Definition of metabolic syndrome: Report of the National Heart, Lung, and Blood Institute/American Heart Association conference on scientific issues related to definition.

Authors:  Scott M Grundy; H Bryan Brewer; James I Cleeman; Sidney C Smith; Claude Lenfant
Journal:  Circulation       Date:  2004-01-27       Impact factor: 29.690

3.  Performing the exact test of Hardy-Weinberg proportion for multiple alleles.

Authors:  S W Guo; E A Thompson
Journal:  Biometrics       Date:  1992-06       Impact factor: 2.571

4.  Insulin-mediated down-regulation of apolipoprotein A5 gene expression through the phosphatidylinositol 3-kinase pathway: role of upstream stimulatory factor.

Authors:  Maxime Nowak; Audrey Helleboid-Chapman; Heidelinde Jakel; Geneviève Martin; Daniel Duran-Sandoval; Bart Staels; Edward M Rubin; Len A Pennacchio; Marja-Riitta Taskinen; Jamila Fruchart-Najib; Jean-Charles Fruchart
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

5.  An apolipoprotein influencing triglycerides in humans and mice revealed by comparative sequencing.

Authors:  L A Pennacchio; M Olivier; J A Hubacek; J C Cohen; D R Cox; J C Fruchart; R M Krauss; E M Rubin
Journal:  Science       Date:  2001-10-05       Impact factor: 47.728

6.  Linkage and association between distinct variants of the APOA1/C3/A4/A5 gene cluster and familial combined hyperlipidemia.

Authors:  Sophie Eichenbaum-Voline; Michael Olivier; Emma L Jones; Rossitza P Naoumova; Bethan Jones; Brian Gau; Hetal N Patel; Mary Seed; D John Betteridge; David J Galton; Edward M Rubin; James Scott; Carol C Shoulders; Len A Pennacchio
Journal:  Arterioscler Thromb Vasc Biol       Date:  2003-10-09       Impact factor: 8.311

7.  CRP and FCGR2A genes have an epistatic effect on carotid artery intima-media thickness: the Cardiovascular Risk in Young Finns Study.

Authors:  T Pessi; C Eklund; H Huhtala; O T Raitakari; M Juonala; M Kähönen; J S A Viikari; T Lehtimäki; M Hurme
Journal:  Int J Immunogenet       Date:  2008-11-25       Impact factor: 1.466

Review 8.  USF1 implicated in the aetiology of familial combined hyperlipidaemia and the metabolic syndrome.

Authors:  Carol C Shoulders; Rossi P Naoumova
Journal:  Trends Mol Med       Date:  2004-08       Impact factor: 11.951

9.  Variation in USF1 shows haplotype effects, gene : gene and gene : environment associations with glucose and lipid parameters in the European Atherosclerosis Research Study II.

Authors:  Wendy Putt; Jutta Palmen; Viviane Nicaud; David-Alexandre Tregouet; Nadia Tahri-Daizadeh; David M Flavell; Steve E Humphries; Philippa J Talmud
Journal:  Hum Mol Genet       Date:  2004-06-02       Impact factor: 6.150

10.  Familial combined hyperlipidemia is associated with upstream transcription factor 1 (USF1).

Authors:  Päivi Pajukanta; Heidi E Lilja; Janet S Sinsheimer; Rita M Cantor; Aldons J Lusis; Massimiliano Gentile; Xiaoqun Joyce Duan; Aino Soro-Paavonen; Jussi Naukkarinen; Janna Saarela; Markku Laakso; Christian Ehnholm; Marja-Riitta Taskinen; Leena Peltonen
Journal:  Nat Genet       Date:  2004-02-29       Impact factor: 38.330

View more
  9 in total

1.  Two polymorphisms of USF1 gene (-202G>A and -844C>T) may be associated with hepatocellular carcinoma susceptibility based on a case-control study in Chinese Han population.

Authors:  Xu Zhou; Hua-qiang Zhu; Chao-qun Ma; Hong-guang Li; Fang-feng Liu; Hong Chang; Jun Lu
Journal:  Med Oncol       Date:  2014-11-01       Impact factor: 3.064

2.  Association analysis of USF1 gene polymorphisms and total unstable carotid plaque area in atherosclerotic stroke patients.

Authors:  Rui-Min Wang; Zhi-Zhong Liu; Yan-Hua Gong; Li-Jun Chen; Qian Jia; Ya-Jie Wang; Fang Fang; Hong Lv; Guo-Jun Zhang; Xi-Xiong Kang
Journal:  J Thromb Thrombolysis       Date:  2013-10       Impact factor: 2.300

3.  Significant association between upstream transcription factor 1 rs2516839 polymorphism and hepatocellular carcinoma risk: a case-control study.

Authors:  Xiaodong Zhao; Tianyi Wang; Bo Liu; Zhenzhou Wu; Shuo Yu; Tao Wang
Journal:  Tumour Biol       Date:  2014-12-06

4.  Novel EDGE encoding method enhances ability to identify genetic interactions.

Authors:  Molly A Hall; John Wallace; Anastasia M Lucas; Yuki Bradford; Shefali S Verma; Bertram Müller-Myhsok; Kristin Passero; Jiayan Zhou; John McGuigan; Beibei Jiang; Sarah A Pendergrass; Yanfei Zhang; Peggy Peissig; Murray Brilliant; Patrick Sleiman; Hakon Hakonarson; John B Harley; Krzysztof Kiryluk; Kristel Van Steen; Jason H Moore; Marylyn D Ritchie
Journal:  PLoS Genet       Date:  2021-06-04       Impact factor: 5.917

5.  Genetic effects at pleiotropic loci are context-dependent with consequences for the maintenance of genetic variation in populations.

Authors:  Heather A Lawson; Janet E Cady; Charlyn Partridge; Jason B Wolf; Clay F Semenkovich; James M Cheverud
Journal:  PLoS Genet       Date:  2011-09-08       Impact factor: 5.917

6.  The rs2516839 Polymorphism of the USF1 Gene May Modulate Serum Triglyceride Levels in Response to Cigarette Smoking.

Authors:  Pawel Niemiec; Tomasz Nowak; Tomasz Iwanicki; Sylwia Gorczynska-Kosiorz; Anna Balcerzyk; Jolanta Krauze; Wladyslaw Grzeszczak; Maria Wiecha; Iwona Zak
Journal:  Int J Mol Sci       Date:  2015-06-10       Impact factor: 5.923

7.  Four pairs of gene-gene interactions associated with increased risk for type 2 diabetes (CDKN2BAS-KCNJ11), obesity (SLC2A9-IGF2BP2, FTO-APOA5), and hypertension (MC4R-IGF2BP2) in Chinese women.

Authors:  M H Wang; J Li; V S Y Yeung; B C Y Zee; R H Y Yu; S Ho; M M Y Waye
Journal:  Meta Gene       Date:  2014-05-21

Review 8.  New insights into apolipoprotein A5 in controlling lipoprotein metabolism in obesity and the metabolic syndrome patients.

Authors:  Xin Su; Yi Kong; Dao-Quan Peng
Journal:  Lipids Health Dis       Date:  2018-07-27       Impact factor: 3.876

9.  Association of Genetically Predicted BCAA Levels with Muscle Fiber Size in Athletes Consuming Protein.

Authors:  Elliott C R Hall; Ekaterina A Semenova; Elvira A Bondareva; Liliya B Andryushchenko; Andrey K Larin; Pawel Cięszczyk; Edward V Generozov; Ildus I Ahmetov
Journal:  Genes (Basel)       Date:  2022-02-23       Impact factor: 4.096

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.