Literature DB >> 20046819

QUANTITATIVE MAGNETIC RESONANCE IMAGE ANALYSIS VIA THE EM ALGORITHM WITH STOCHASTIC VARIATION.

Xiaoxi Zhang1, Timothy D Johnson, Roderick J A Little, Yue Cao.   

Abstract

Quantitative Magnetic Resonance Imaging (qMRI) provides researchers insight into pathological and physiological alterations of living tissue, with the help of which, researchers hope to predict (local) therapeutic efficacy early and determine optimal treatment schedule. However, the analysis of qMRI has been limited to ad-hoc heuristic methods. Our research provides a powerful statistical framework for image analysis and sheds light on future localized adaptive treatment regimes tailored to the individual's response. We assume in an imperfect world we only observe a blurred and noisy version of the underlying pathological/physiological changes via qMRI, due to measurement errors or unpredictable influences. We use a hidden Markov Random Field to model the spatial dependence in the data and develop a maximum likelihood approach via the Expectation-Maximization algorithm with stochastic variation. An important improvement over previous work is the assessment of variability in parameter estimation, which is the valid basis for statistical inference. More importantly, we focus on the expected changes rather than image segmentation. Our research has shown that the approach is powerful in both simulation studies and on a real dataset, while quite robust in the presence of some model assumption violations.

Entities:  

Year:  2008        PMID: 20046819      PMCID: PMC2799942          DOI: 10.1214/07-AOAS157

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   2.083


  15 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Probabilistic modeling of single-trial fMRI data.

Authors:  M Svensén; F Kruggel; D Y von Cramon
Journal:  IEEE Trans Med Imaging       Date:  2000-01       Impact factor: 10.048

3.  Bayesian approach to segmentation of statistical parametric maps.

Authors:  J C Rajapakse; J Piyaratna
Journal:  IEEE Trans Biomed Eng       Date:  2001-10       Impact factor: 4.538

4.  Nonuniversal critical dynamics in Monte Carlo simulations.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-01-12       Impact factor: 9.161

5.  Mixture models with adaptive spatial regularization for segmentation with an application to FMRI data.

Authors:  Mark W Woolrich; Timothy E J Behrens; Christian F Beckmann; Stephen M Smith
Journal:  IEEE Trans Med Imaging       Date:  2005-01       Impact factor: 10.048

6.  Contextual modeling of functional MR images with conditional random fields.

Authors:  Yang Wang; Jagath C Rajapakse
Journal:  IEEE Trans Med Imaging       Date:  2006-06       Impact factor: 10.048

7.  Use of magnetic resonance imaging to assess blood-brain/blood-glioma barrier opening during conformal radiotherapy.

Authors:  Yue Cao; Christina I Tsien; Zhou Shen; Daniel S Tatro; Randall Ten Haken; Marc L Kessler; Thomas L Chenevert; Theodore S Lawrence
Journal:  J Clin Oncol       Date:  2005-06-20       Impact factor: 44.544

8.  Maximum-likelihood parameter estimation for unsupervised stochastic model-based image segmentation.

Authors:  J Zhang; J W Modestino; D A Langan
Journal:  IEEE Trans Image Process       Date:  1994       Impact factor: 10.856

9.  Parameter estimation and tissue segmentation from multispectral MR images.

Authors:  Z Liang; J R Macfall; D P Harrington
Journal:  IEEE Trans Med Imaging       Date:  1994       Impact factor: 10.048

10.  Evaluation of the functional diffusion map as an early biomarker of time-to-progression and overall survival in high-grade glioma.

Authors:  Daniel A Hamstra; Thomas L Chenevert; Bradford A Moffat; Timothy D Johnson; Charles R Meyer; Suresh K Mukherji; Douglas J Quint; Stephen S Gebarski; Xiaoying Fan; Christina I Tsien; Theodore S Lawrence; Larry Junck; Alnawaz Rehemtulla; Brian D Ross
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-02       Impact factor: 11.205

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  5 in total

1.  Longitudinal Image Analysis of Tumor/Healthy Brain Change in Contrast Uptake Induced by Radiation.

Authors:  Xiaoxi Zhang; Timothy D Johnson; Roderick J A Little; Yue Cao
Journal:  J R Stat Soc Ser C Appl Stat       Date:  2010-11-01       Impact factor: 1.864

2.  A Bayesian Image Analysis of Radiation Induced Changes in Tumor Vascular Permeability.

Authors:  Xiaoxi Zhang; Timothy D Johnson; Roderick J A Little; Yue Cao
Journal:  Bayesian Anal       Date:  2010       Impact factor: 3.728

3.  Multiple testing for neuroimaging via hidden Markov random field.

Authors:  Hai Shu; Bin Nan; Robert Koeppe
Journal:  Biometrics       Date:  2015-05-26       Impact factor: 2.571

4.  Evaluation of image registration spatial accuracy using a Bayesian hierarchical model.

Authors:  Suyu Liu; Ying Yuan; Richard Castillo; Thomas Guerrero; Valen E Johnson
Journal:  Biometrics       Date:  2014-02-27       Impact factor: 2.571

5.  Change point estimation in multi-subject fMRI studies.

Authors:  Lucy F Robinson; Tor D Wager; Martin A Lindquist
Journal:  Neuroimage       Date:  2009-09-04       Impact factor: 6.556

  5 in total

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