Literature DB >> 20046570

Engineered CH2 domains (nanoantibodies).

Dimiter S Dimitrov1.   

Abstract

Currently, almost all FDA approved therapeutic antibodies (except ReoPro, Lucentis and Cimzia which are Fabs), and the vast majority of those in clinical trials are full-size antibodies mostly in IgG1 format of about 150 kDa size. A fundamental problem for such large molecules is their poor penetration into tissues (e.g., solid tumors) and poor or absent binding to regions on the surface of some molecules (e.g., on the HIV envelope glycoprotein) which are fully accessible only by molecules of smaller size. Therefore, much work especially during the last decade has been aimed at developing novel scaffolds of much smaller size and high stability. Here I briefly describe a proposition to use the immunoglobulin (Ig) constant CH2 domain (CH3 for IgE and IgM) as a scaffold. CH2 is critical for the Ig effector functions. Isolated CH2 is stable monomer in contrast to all other constant domains and most of the variable domains. CH2 and engineered CH2 domains with improved stability can be used as scaffolds for construction of libraries containing diverse binders to various antigens. Such binders based on a CH2 scaffold could also confer some effector functions. Because the CH2 domains are the smallest independently folded antibody domains that can be engineered to contain simultaneously antigen-binding sites and binding sites mediating effector and stability functions, and to distinguish them from domain antibodies which are used to denote engineered VH or VL domains or nanobodies which are used to denote camelid VHH, I termed them nanoantibodies (nAbs).

Entities:  

Keywords:  CH2; Fabs; antibodies; nanoantibodies; scaffold

Mesh:

Substances:

Year:  2009        PMID: 20046570      PMCID: PMC2715188          DOI: 10.4161/mabs.1.1.7480

Source DB:  PubMed          Journal:  MAbs        ISSN: 1942-0862            Impact factor:   5.857


  14 in total

1.  Crystal structure at 2.8 A of an FcRn/heterodimeric Fc complex: mechanism of pH-dependent binding.

Authors:  W L Martin; A P West; L Gan; P J Bjorkman
Journal:  Mol Cell       Date:  2001-04       Impact factor: 17.970

Review 2.  Domain antibodies: proteins for therapy.

Authors:  Lucy J Holt; Chris Herring; Laurent S Jespers; Benjamin P Woolven; Ian M Tomlinson
Journal:  Trends Biotechnol       Date:  2003-11       Impact factor: 19.536

Review 3.  Binding proteins from alternative scaffolds.

Authors:  Per-Ake Nygren; Arne Skerra
Journal:  J Immunol Methods       Date:  2004-07       Impact factor: 2.303

Review 4.  Engineered antibody fragments and the rise of single domains.

Authors:  Philipp Holliger; Peter J Hudson
Journal:  Nat Biotechnol       Date:  2005-09       Impact factor: 54.908

Review 5.  Artificial, non-antibody binding proteins for pharmaceutical and industrial applications.

Authors:  Thomas Hey; Erik Fiedler; Rainer Rudolph; Markus Fiedler
Journal:  Trends Biotechnol       Date:  2005-10       Impact factor: 19.536

6.  Folding mechanism of the CH2 antibody domain.

Authors:  Matthias J Feige; Stefan Walter; Johannes Buchner
Journal:  J Mol Biol       Date:  2004-11-12       Impact factor: 5.469

Review 7.  Alternative non-antibody scaffolds for molecular recognition.

Authors:  Arne Skerra
Journal:  Curr Opin Biotechnol       Date:  2007-07-20       Impact factor: 9.740

8.  Alternative binding proteins get mature: rivalling antibodies.

Authors:  Harald Kolmar; Arne Skerra
Journal:  FEBS J       Date:  2008-04-24       Impact factor: 5.542

9.  Construction of a large phage-displayed human antibody domain library with a scaffold based on a newly identified highly soluble, stable heavy chain variable domain.

Authors:  Weizao Chen; Zhongyu Zhu; Yang Feng; Xiaodong Xiao; Dimiter S Dimitrov
Journal:  J Mol Biol       Date:  2008-07-26       Impact factor: 5.469

10.  Dynamics of antibody domains studied by solution NMR.

Authors:  Bang K Vu; Joseph D Walsh; Dimiter S Dimitrov; Rieko Ishima
Journal:  Methods Mol Biol       Date:  2009
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  31 in total

Review 1.  Therapeutic proteins.

Authors:  Dimiter S Dimitrov
Journal:  Methods Mol Biol       Date:  2012

2.  Engineered soluble monomeric IgG1 CH3 domain: generation, mechanisms of function, and implications for design of biological therapeutics.

Authors:  Tianlei Ying; Weizao Chen; Yang Feng; Yanping Wang; Rui Gong; Dimiter S Dimitrov
Journal:  J Biol Chem       Date:  2013-07-18       Impact factor: 5.157

3.  Shortened engineered human antibody CH2 domains: increased stability and binding to the human neonatal Fc receptor.

Authors:  Rui Gong; Yanping Wang; Yang Feng; Qi Zhao; Dimiter S Dimitrov
Journal:  J Biol Chem       Date:  2011-06-13       Impact factor: 5.157

4.  A large human domain antibody library combining heavy and light chain CDR3 diversity.

Authors:  Weizao Chen; Zhongyu Zhu; Yang Feng; Dimiter S Dimitrov
Journal:  Mol Immunol       Date:  2009-11-01       Impact factor: 4.407

5.  Yeast display of engineered antibody domains.

Authors:  Qi Zhao; Zhongyu Zhu; Dimiter S Dimitrov
Journal:  Methods Mol Biol       Date:  2012

6.  Expression, purification, and characterization of engineered antibody CH2 and VH domains.

Authors:  Rui Gong; Weizao Chen; Dimiter S Dimitrov
Journal:  Methods Mol Biol       Date:  2012

Review 7.  Engineered Fc based antibody domains and fragments as novel scaffolds.

Authors:  Tianlei Ying; Rui Gong; Tina W Ju; Ponraj Prabakaran; Dimiter S Dimitrov
Journal:  Biochim Biophys Acta       Date:  2014-05-02

Review 8.  Candidate antibody-based therapeutics against HIV-1.

Authors:  Rui Gong; Weizao Chen; Dimiter S Dimitrov
Journal:  BioDrugs       Date:  2012-06-01       Impact factor: 5.807

9.  A large library based on a novel (CH2) scaffold: identification of HIV-1 inhibitors.

Authors:  Xiaodong Xiao; Yang Feng; Bang K Vu; Rieko Ishima; Dimiter S Dimitrov
Journal:  Biochem Biophys Res Commun       Date:  2009-07-15       Impact factor: 3.575

Review 10.  Discovery of novel candidate therapeutics and diagnostics based on engineered human antibody domains.

Authors:  Weizao Chen; Rui Gong; Tianlei Ying; Ponraj Prabakaran; Zhongyu Zhu; Yang Feng; Dimiter S Dimitrov
Journal:  Curr Drug Discov Technol       Date:  2014-03
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