Literature DB >> 20034500

The origin of the biologically coded amino acids.

H James Cleaves1.   

Abstract

Biology uses essentially 20 amino acids for its coded protein enzymes, representing a very small subset of the structurally possible set. Most models of the origin of life suggest organisms developed from environmentally available organic compounds. A variety of amino acids are easily produced under conditions which were believed to have existed on the primitive Earth or in the early solar nebula. The types of amino acids produced depend on the conditions which prevailed at the time of synthesis, which remain controversial. The selection of the biological set is likely due to chemical and early biological evolution acting on the environmentally available compounds based on their chemical properties. Once life arose, selection would have proceeded based on the functional utility of amino acids coupled with their accessibility by primitive metabolism and their compatibility with other biochemical processes. Some possible mechanisms by which the modern set of 20 amino acids was selected starting from prebiotic chemistry are discussed. (c) 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 20034500     DOI: 10.1016/j.jtbi.2009.12.014

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  34 in total

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3.  Are molecular alphabets universal enabling factors for the evolution of complex life?

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Journal:  Orig Life Evol Biosph       Date:  2014-02-09       Impact factor: 1.950

4.  Genetic code evolution started with the incorporation of glycine, followed by other small hydrophilic amino acids.

Authors:  Harold S Bernhardt; Wayne M Patrick
Journal:  J Mol Evol       Date:  2014-06-12       Impact factor: 2.395

5.  Chance and necessity in biochemistry: implications for the search for extraterrestrial biomarkers in Earth-like environments.

Authors:  Alfonso F Davila; Christopher P McKay
Journal:  Astrobiology       Date:  2014-05-27       Impact factor: 4.335

6.  Reconstruction and Characterization of Thermally Stable and Catalytically Active Proteins Comprising an Alphabet of ~ 13 Amino Acids.

Authors:  Madoka Kimura; Satoshi Akanuma
Journal:  J Mol Evol       Date:  2020-03-23       Impact factor: 2.395

7.  Surveying the sequence diversity of model prebiotic peptides by mass spectrometry.

Authors:  Jay G Forsythe; Anton S Petrov; W Calvin Millar; Sheng-Sheng Yu; Ramanarayanan Krishnamurthy; Martha A Grover; Nicholas V Hud; Facundo M Fernández
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-28       Impact factor: 11.205

8.  A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.

Authors:  Liam M Longo; Connie A Tenorio; Ozan S Kumru; C Russell Middaugh; Michael Blaber
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9.  Predicting Thermodynamic Behaviors of Non-Protein Amino Acids as a Function of Temperature and pH.

Authors:  Norio Kitadai
Journal:  Orig Life Evol Biosph       Date:  2015-08-19       Impact factor: 1.950

10.  Uniquely localized intra-molecular amino acid concentrations at the glycolytic enzyme catalytic/active centers of Archaea, Bacteria and Eukaryota are associated with their proposed temporal appearances on earth.

Authors:  J Dennis Pollack; David Gerard; Dennis K Pearl
Journal:  Orig Life Evol Biosph       Date:  2013-05-29       Impact factor: 1.950

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