Literature DB >> 20028713

Multi-scale modelling in computational biomedicine.

Peter M A Sloot1, Alfons G Hoekstra.   

Abstract

The inherent complexity of biomedical systems is well recognized; they are multi-scale, multi-science systems, bridging a wide range of temporal and spatial scales. This article reviews the currently emerging field of multi-scale modelling in computational biomedicine. Many exciting multi-scale models exist or are under development. However, an underpinning multi-scale modelling methodology seems to be missing. We propose a direction that complements the classic dynamical systems approach and introduce two distinct case studies, transmission of resistance in human immunodeficiency virus spreading and in-stent restenosis in coronary artery disease.

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Year:  2009        PMID: 20028713     DOI: 10.1093/bib/bbp038

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  13 in total

1.  Semi-intrusive multiscale metamodelling uncertainty quantification with application to a model of in-stent restenosis.

Authors:  A Nikishova; L Veen; P Zun; A G Hoekstra
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-04-08       Impact factor: 4.226

Review 2.  Multiscale cancer modeling.

Authors:  Thomas S Deisboeck; Zhihui Wang; Paul Macklin; Vittorio Cristini
Journal:  Annu Rev Biomed Eng       Date:  2011-08-15       Impact factor: 9.590

3.  Strategies for efficient numerical implementation of hybrid multi-scale agent-based models to describe biological systems.

Authors:  Nicholas A Cilfone; Denise E Kirschner; Jennifer J Linderman
Journal:  Cell Mol Bioeng       Date:  2015-03       Impact factor: 2.321

4.  Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations.

Authors:  D Groen; J Borgdorff; C Bona-Casas; J Hetherington; R W Nash; S J Zasada; I Saverchenko; M Mamonski; K Kurowski; M O Bernabeu; A G Hoekstra; P V Coveney
Journal:  Interface Focus       Date:  2013-04-06       Impact factor: 3.906

5.  Performance of distributed multiscale simulations.

Authors:  J Borgdorff; M Ben Belgacem; C Bona-Casas; L Fazendeiro; D Groen; O Hoenen; A Mizeranschi; J L Suter; D Coster; P V Coveney; W Dubitzky; A G Hoekstra; P Strand; B Chopard
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2014-08-06       Impact factor: 4.226

Review 6.  Modeling biology spanning different scales: an open challenge.

Authors:  Filippo Castiglione; Francesco Pappalardo; Carlo Bianca; Giulia Russo; Santo Motta
Journal:  Biomed Res Int       Date:  2014-07-17       Impact factor: 3.411

Review 7.  Computational modeling of drug response with applications to neuroscience.

Authors:  Ralf Herwig
Journal:  Dialogues Clin Neurosci       Date:  2014-12       Impact factor: 5.986

Review 8.  Computational modeling of heterogeneity and function of CD4+ T cells.

Authors:  Adria Carbo; Raquel Hontecillas; Tricity Andrew; Kristin Eden; Yongguo Mei; Stefan Hoops; Josep Bassaganya-Riera
Journal:  Front Cell Dev Biol       Date:  2014-07-29

Review 9.  Moving H5N1 studies into the era of systems biology.

Authors:  Laurence Josset; Jennifer Tisoncik-Go; Michael G Katze
Journal:  Virus Res       Date:  2013-03-14       Impact factor: 3.303

10.  Multiscale modeling of mucosal immune responses.

Authors:  Yongguo Mei; Vida Abedi; Adria Carbo; Xiaoying Zhang; Pinyi Lu; Casandra Philipson; Raquel Hontecillas; Stefan Hoops; Nathan Liles; Josep Bassaganya-Riera
Journal:  BMC Bioinformatics       Date:  2015-08-25       Impact factor: 3.169

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