Literature DB >> 20026607

Repair of O4-alkylthymine by O6-alkylguanine-DNA alkyltransferases.

Qingming Fang1, Sreenivas Kanugula, Julie L Tubbs, John A Tainer, Anthony E Pegg.   

Abstract

O(6)-Alkylguanine-DNA alkyltransferase (AGT) plays a major role in repair of the cytotoxic and mutagenic lesion O(6)-methylguanine (m(6)G) in DNA. Unlike the Escherichia coli alkyltransferase Ogt that also repairs O(4)-methylthymine (m(4)T) efficiently, the human AGT (hAGT) acts poorly on m(4)T. Here we made several hAGT mutants in which residues near the cysteine acceptor site were replaced by corresponding residues from Ogt to investigate the basis for the inefficiency of hAGT in repair of m(4)T. Construct hAGT-03 (where hAGT sequence -V(149)CSSGAVGN(157)- was replaced with the corresponding Ogt -I(143)GRNGTMTG(151)-) exhibited enhanced m(4)T repair activity in vitro compared with hAGT. Three AGT proteins (hAGT, hAGT-03, and Ogt) exhibited similar protection from killing by N-methyl-N'-nitro-N-nitrosoguanidine and caused a reduction in m(6)G-induced G:C to A:T mutations in both nucleotide excision repair (NER)-proficient and -deficient Escherichia coli strains that lack endogenous AGTs. hAGT-03 resembled Ogt in totally reducing the m(4)T-induced T:A to C:G mutations in NER-proficient and -deficient strains. Surprisingly, wild type hAGT expression caused a significant but incomplete decrease in NER-deficient strains but a slight increase in T:A to C:G mutation frequency in NER-proficient strains. The T:A to C:G mutations due to O(4)-alkylthymine formed by ethylating and propylating agents were also efficiently reduced by either hAGT-03 or Ogt, whereas hAGT had little effect irrespective of NER status. These results show that specific alterations in the hAGT active site facilitate efficient recognition and repair of O(4)-alkylthymines and reveal damage-dependent interactions of base and nucleotide excision repair.

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Year:  2009        PMID: 20026607      PMCID: PMC2832970          DOI: 10.1074/jbc.M109.045518

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  72 in total

Review 1.  DNA repair mechanisms for the recognition and removal of damaged DNA bases.

Authors:  C D Mol; S S Parikh; C D Putnam; T P Lo; J A Tainer
Journal:  Annu Rev Biophys Biomol Struct       Date:  1999

2.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

3.  DNA binding mechanism of O6-alkylguanine-DNA alkyltransferase: stoichiometry and effects of DNA base composition and secondary structure on complex stability.

Authors:  M G Fried; S Kanugula; J L Bromberg; A E Pegg
Journal:  Biochemistry       Date:  1996-12-03       Impact factor: 3.162

4.  Fast repair of O6-ethylguanine, but not O6-methylguanine, in transcribed genes prevents mutation of H-ras in rat mammary tumorigenesis induced by ethylnitrosourea in place of methylnitrosourea.

Authors:  J Engelbergs; J Thomale; A Galhoff; M F Rajewsky
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

5.  Formation of a covalent complex between methylguanine methyltransferase and DNA via disulfide bond formation between the active site cysteine and a thiol-containing analog of guanine.

Authors:  S R Paalman; D M Noll; N D Clarke
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

6.  Redesigning the substrate specificity of human O(6)-alkylguanine-DNA alkyltransferase. Mutants with enhanced repair of O(4)-methylthymine.

Authors:  L P Encell; L A Loeb
Journal:  Biochemistry       Date:  1999-09-14       Impact factor: 3.162

7.  Mammalian DNA repair methyltransferases shield O4MeT from nucleotide excision repair.

Authors:  L Samson; S Han; J C Marquis; L J Rasmussen
Journal:  Carcinogenesis       Date:  1997-05       Impact factor: 4.944

8.  Identification and characterisation of the Drosophila melanogaster O6-alkylguanine-DNA alkyltransferase cDNA.

Authors:  R Kooistra; J B Zonneveld; A J Watson; G P Margison; P H Lohman; A Pastink
Journal:  Nucleic Acids Res       Date:  1999-04-15       Impact factor: 16.971

9.  Comparison of mutagenesis by O6-methyl- and O6-ethylguanine and O4-methylthymine in Escherichia coli using double-stranded and gapped plasmids.

Authors:  G T Pauly; S H Hughes; R C Moschel
Journal:  Carcinogenesis       Date:  1998-03       Impact factor: 4.944

10.  Repair of O6-benzylguanine by the Escherichia coli Ada and Ogt and the human O6-alkylguanine-DNA alkyltransferases.

Authors:  K Goodtzova; S Kanugula; S Edara; G T Pauly; R C Moschel; A E Pegg
Journal:  J Biol Chem       Date:  1997-03-28       Impact factor: 5.157

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  11 in total

Review 1.  Alkyltransferase-like proteins: molecular switches between DNA repair pathways.

Authors:  Julie L Tubbs; John A Tainer
Journal:  Cell Mol Life Sci       Date:  2010-05-26       Impact factor: 9.261

2.  6-Carboxyfluorescein and structurally similar molecules inhibit DNA binding and repair by O⁶-alkylguanine DNA alkyltransferase.

Authors:  Manana Melikishvili; David W Rodgers; Michael G Fried
Journal:  DNA Repair (Amst)       Date:  2011-10-05

Review 3.  Multifaceted roles of alkyltransferase and related proteins in DNA repair, DNA damage, resistance to chemotherapy, and research tools.

Authors:  Anthony E Pegg
Journal:  Chem Res Toxicol       Date:  2011-04-28       Impact factor: 3.739

Review 4.  Insight into the cooperative DNA binding of the O⁶-alkylguanine DNA alkyltransferase.

Authors:  Ingrid Tessmer; Michael G Fried
Journal:  DNA Repair (Amst)       Date:  2014-02-16

5.  Repair of O6-methylguanine adducts in human telomeric G-quadruplex DNA by O6-alkylguanine-DNA alkyltransferase.

Authors:  Lance M Hellman; Tyler J Spear; Colton J Koontz; Manana Melikishvili; Michael G Fried
Journal:  Nucleic Acids Res       Date:  2014-07-30       Impact factor: 16.971

6.  DNA-protein crosslinks processed by nucleotide excision repair and homologous recombination with base and strand preference in E. coli model system.

Authors:  Qingming Fang
Journal:  Mutat Res       Date:  2013-03-15       Impact factor: 2.433

7.  Lesion-specific DNA-binding and repair activities of human O⁶-alkylguanine DNA alkyltransferase.

Authors:  Manana Melikishvili; Michael G Fried
Journal:  Nucleic Acids Res       Date:  2012-07-18       Impact factor: 16.971

8.  Cooperative cluster formation, DNA bending and base-flipping by O6-alkylguanine-DNA alkyltransferase.

Authors:  Ingrid Tessmer; Manana Melikishvili; Michael G Fried
Journal:  Nucleic Acids Res       Date:  2012-06-22       Impact factor: 16.971

9.  2'-Deoxythymidine adducts from the anti-HIV drug nevirapine.

Authors:  Alexandra M M Antunes; Benjamin Wolf; M Conceição Oliveira; Frederick A Beland; M Matilde Marques
Journal:  Molecules       Date:  2013-04-26       Impact factor: 4.411

10.  Cytotoxic and mutagenic properties of O4-alkylthymidine lesions in Escherichia coli cells.

Authors:  Pengcheng Wang; Nicholas J Amato; Qianqian Zhai; Yinsheng Wang
Journal:  Nucleic Acids Res       Date:  2015-09-22       Impact factor: 16.971

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