Literature DB >> 20025975

Cryo-electron tomography of microtubule-kinesin motor complexes.

Julia Cope1, Susan Gilbert, Ivan Rayment, David Mastronarde, Andreas Hoenger.   

Abstract

Microtubules complexed with molecular motors of the kinesin family or non-motor microtubule associated proteins (MAPs) such as tau or EB1 have been the subject of cryo-electron microcopy based 3-D studies for several years. Most of these studies that targeted complexes with intact microtubules have been carried out by helical 3-D reconstruction, while few were analyzed by single particle approaches or from 2-D crystalline arrays. Helical reconstruction of microtubule-MAP or motor complexes has been extremely successful but by definition, all helical 3-D reconstruction attempts require perfectly helical assemblies, which presents a serious limitation and confines the attempts to 15- or 16-protofilament microtubules, microtubule configurations that are very rare in nature. The rise of cryo-electron tomography within the last few years has now opened a new avenue towards solving 3-D structures of microtubule-MAP complexes that do not form helical assemblies, most importantly for the subject here, all microtubules that exhibit a lattice seam. In addition, not all motor domains or MAPs decorate the microtubule surface regularly enough to match the underlying microtubule lattice, or they adopt conformations that deviate from helical symmetry. Here we demonstrate the power and limitation of cryo-electron tomography using two kinesin motor domains, the monomeric Eg5 motor domain, and the heterodimeric Kar3Vik1 motor. We show here that tomography does not exclude the possibility of post-tomographic averaging when identical sub-volumes can be extracted from tomograms and in both cases we were able to reconstruct 3-D maps of conformations that are not possible to obtain using helical or other averaging-based methods. Copyright 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 20025975      PMCID: PMC2856765          DOI: 10.1016/j.jsb.2009.12.004

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  58 in total

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Authors:  B D Manning; M Snyder
Journal:  Trends Cell Biol       Date:  2000-07       Impact factor: 20.808

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Journal:  J Struct Biol       Date:  1999 Apr-May       Impact factor: 2.867

3.  Microtubule structure at 8 A resolution.

Authors:  Huilin Li; David J DeRosier; William V Nicholson; Eva Nogales; Kenneth H Downing
Journal:  Structure       Date:  2002-10       Impact factor: 5.006

4.  Monastrol stabilises an attached low-friction mode of Eg5.

Authors:  I M-T C Crevel; M C Alonso; R A Cross
Journal:  Curr Biol       Date:  2004-06-08       Impact factor: 10.834

5.  Kinesin Kar3 and Vik1 go head to head.

Authors:  Günther Woehlke; Manfred Schliwa
Journal:  Cell       Date:  2007-03-23       Impact factor: 41.582

Review 6.  Kinesin superfamily motor proteins and intracellular transport.

Authors:  Nobutaka Hirokawa; Yasuko Noda; Yosuke Tanaka; Shinsuke Niwa
Journal:  Nat Rev Mol Cell Biol       Date:  2009-10       Impact factor: 94.444

Review 7.  Tubulin and FtsZ form a distinct family of GTPases.

Authors:  E Nogales; K H Downing; L A Amos; J Löwe
Journal:  Nat Struct Biol       Date:  1998-06

8.  Crystal structure of the motor domain of the kinesin-related motor ncd.

Authors:  E P Sablin; F J Kull; R Cooke; R D Vale; R J Fletterick
Journal:  Nature       Date:  1996-04-11       Impact factor: 49.962

9.  Image reconstructions of microtubules decorated with monomeric and dimeric kinesins: comparison with x-ray structure and implications for motility.

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Journal:  J Cell Biol       Date:  1998-04-20       Impact factor: 10.539

10.  Differential regulation of the Kar3p kinesin-related protein by two associated proteins, Cik1p and Vik1p.

Authors:  B D Manning; J G Barrett; J A Wallace; H Granok; M Snyder
Journal:  J Cell Biol       Date:  1999-03-22       Impact factor: 10.539

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  18 in total

1.  The ATPase pathway that drives the kinesin-14 Kar3Vik1 powerstroke.

Authors:  Chun Ju Chen; Ken Porche; Ivan Rayment; Susan P Gilbert
Journal:  J Biol Chem       Date:  2012-09-12       Impact factor: 5.157

2.  Clustering and variance maps for cryo-electron tomography using wedge-masked differences.

Authors:  John M Heumann; Andreas Hoenger; David N Mastronarde
Journal:  J Struct Biol       Date:  2011-05-17       Impact factor: 2.867

3.  Cryo-electron tomography for structural characterization of macromolecular complexes.

Authors:  Julia Cope; John Heumann; Andreas Hoenger
Journal:  Curr Protoc Protein Sci       Date:  2011-08

Review 4.  Electron Tomography: A Three-Dimensional Analytic Tool for Hard and Soft Materials Research.

Authors:  Peter Ercius; Osama Alaidi; Matthew J Rames; Gang Ren
Journal:  Adv Mater       Date:  2015-06-18       Impact factor: 30.849

5.  Common mechanistic themes for the powerstroke of kinesin-14 motors.

Authors:  Miguel A Gonzalez; Julia Cope; Katherine C Rank; Chun Ju Chen; Peter Tittmann; Ivan Rayment; Susan P Gilbert; Andreas Hoenger
Journal:  J Struct Biol       Date:  2013-10-04       Impact factor: 2.867

Review 6.  Functional asymmetry in kinesin and dynein dimers.

Authors:  Katherine C Rank; Ivan Rayment
Journal:  Biol Cell       Date:  2012-12-05       Impact factor: 4.458

7.  A detailed look at the cytoskeletal architecture of the Giardia lamblia ventral disc.

Authors:  Joanna R Brown; Cindi L Schwartz; John M Heumann; Scott C Dawson; Andreas Hoenger
Journal:  J Struct Biol       Date:  2016-01-25       Impact factor: 2.867

8.  Radiation damage in single-particle cryo-electron microscopy: effects of dose and dose rate.

Authors:  Manikandan Karuppasamy; Fatemeh Karimi Nejadasl; Milos Vulovic; Abraham J Koster; Raimond B G Ravelli
Journal:  J Synchrotron Radiat       Date:  2011-04-09       Impact factor: 2.616

9.  A detailed, hierarchical study of Giardia lamblia's ventral disc reveals novel microtubule-associated protein complexes.

Authors:  Cindi L Schwartz; John M Heumann; Scott C Dawson; Andreas Hoenger
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

10.  Kar3Vik1 uses a minus-end directed powerstroke for movement along microtubules.

Authors:  Julia Cope; Katherine C Rank; Susan P Gilbert; Ivan Rayment; Andreas Hoenger
Journal:  PLoS One       Date:  2013-01-14       Impact factor: 3.240

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