Literature DB >> 20024624

Falling-edge, variable threshold (FEVT) method for the automated detection of gastric slow wave events in high-resolution serosal electrode recordings.

Jonathan C Erickson1, Gregory O'Grady, Peng Du, Chibuike Obioha, Wenlian Qiao, William O Richards, L Alan Bradshaw, Andrew J Pullan, Leo K Cheng.   

Abstract

High resolution (HR) multi-electrode mapping is increasingly being used to evaluate gastrointestinal slow wave behaviors. To create the HR activation time (AT) maps from gastric serosal electrode recordings that quantify slow wave propagation, it is first necessary to identify the AT of each individual slow wave event. Identifying these ATs has been a time consuming task, because there has previously been no reliable automated detection method. We have developed an automated AT detection method termed falling-edge, variable threshold (FEVT) detection. It computes a detection signal transform to accentuate the high 'energy' content of the falling edges in the serosal recording, and uses a running median estimator of the noise to set the time-varying detection threshold. The FEVT method was optimized, validated, and compared to other potential algorithms using in vivo HR recordings from a porcine model. FEVT properly detects ATs in a wide range of waveforms, making its performance substantially superior to the other methods, especially for low signal-to-noise ratio (SNR) recordings. The algorithm offered a substantial time savings (>100 times) over manual-marking whilst achieving a highly satisfactory sensitivity (0.92) and positive-prediction value (0.89).

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Year:  2009        PMID: 20024624      PMCID: PMC2855965          DOI: 10.1007/s10439-009-9870-3

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  23 in total

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6.  Electrophysiologic and anatomic basis for fractionated electrograms recorded from healed myocardial infarcts.

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Journal:  Circulation       Date:  1985-09       Impact factor: 29.690

7.  Automated detection of gastric slow wave events and estimation of propagation velocity vector fields from serosal high-resolution mapping.

Authors:  Peng Du; Wenlian Qiao; Greg O'Grady; John U Egbuji; Wim Lammers; Leo K Cheng; Andrew J Pullan
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009

8.  A tissue framework for simulating the effects of gastric electrical stimulation and in vivo validation.

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9.  Noninvasive diagnosis of mesenteric ischemia using a SQUID magnetometer.

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10.  A novel laparoscopic device for measuring gastrointestinal slow-wave activity.

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  44 in total

1.  Automated gastric slow wave cycle partitioning and visualization for high-resolution activation time maps.

Authors:  Jonathan C Erickson; Greg O'Grady; Peng Du; John U Egbuji; Andrew J Pullan; Leo K Cheng
Journal:  Ann Biomed Eng       Date:  2010-10-07       Impact factor: 3.934

Review 2.  Multiscale modeling of gastrointestinal electrophysiology and experimental validation.

Authors:  Peng Du; Greg O'Grady; John B Davidson; Leo K Cheng; Andrew J Pullan
Journal:  Crit Rev Biomed Eng       Date:  2010

3.  Movement based artifacts may contaminate extracellular electrical recordings from GI muscles.

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4.  Abnormal initiation and conduction of slow-wave activity in gastroparesis, defined by high-resolution electrical mapping.

Authors:  Gregory O'Grady; Timothy R Angeli; Peng Du; Chris Lahr; Wim J E P Lammers; John A Windsor; Thomas L Abell; Gianrico Farrugia; Andrew J Pullan; Leo K Cheng
Journal:  Gastroenterology       Date:  2012-05-27       Impact factor: 22.682

Review 5.  Gastric arrhythmias in gastroparesis: low- and high-resolution mapping of gastric electrical activity.

Authors:  Gregory O'Grady; Thomas L Abell
Journal:  Gastroenterol Clin North Am       Date:  2014-12-29       Impact factor: 3.806

6.  The bioelectrical basis and validity of gastrointestinal extracellular slow wave recordings.

Authors:  Timothy R Angeli; Peng Du; Niranchan Paskaranandavadivel; Patrick W M Janssen; Arthur Beyder; Roger G Lentle; Ian P Bissett; Leo K Cheng; Gregory O'Grady
Journal:  J Physiol       Date:  2013-05-27       Impact factor: 5.182

Review 7.  Mapping and modeling gastrointestinal bioelectricity: from engineering bench to bedside.

Authors:  L K Cheng; P Du; G O'Grady
Journal:  Physiology (Bethesda)       Date:  2013-09

Review 8.  Problems with extracellular recording of electrical activity in gastrointestinal muscle.

Authors:  Kenton M Sanders; Sean M Ward; Grant W Hennig
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2016-10-19       Impact factor: 46.802

9.  Automated classification and identification of slow wave propagation patterns in gastric dysrhythmia.

Authors:  Niranchan Paskaranandavadivel; Jerry Gao; Peng Du; Gregory O'Grady; Leo K Cheng
Journal:  Ann Biomed Eng       Date:  2013-09-19       Impact factor: 3.934

10.  Automated algorithm for GI spike burst detection and demonstration of efficacy in ischemic small intestine.

Authors:  Jonathan C Erickson; Raisa Velasco-Castedo; Chibuike Obioha; Leo K Cheng; Timothy R Angeli; Greg O'Grady
Journal:  Ann Biomed Eng       Date:  2013-04-24       Impact factor: 3.934

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