Literature DB >> 24048711

Automated classification and identification of slow wave propagation patterns in gastric dysrhythmia.

Niranchan Paskaranandavadivel1, Jerry Gao, Peng Du, Gregory O'Grady, Leo K Cheng.   

Abstract

The advent of high-resolution (HR) electrical mapping of slow wave activity has significantly improved the understanding of gastric slow wave activity in normal and dysrhythmic states. One of the current limitations of this technique is it generates a vast amount of data, making manual analysis a tedious task for research and clinical development. In this study we present new automated methods to classify, identify, and locate patterns of interest in gastric slow wave propagation. The classification method uses a similarity metric to classify slow wave propagations, while the identification algorithm uses the divergence and mean curvature of the slow wave propagation to identify and regionalize patterns of interest. The methods were applied to synthetic and experimental datasets and were also compared to manual analysis. The methods classified and identified patterns of slow wave propagation in less than 1 s, compared to manual analysis which took up to 40 min. The automated methods achieved 96% accuracy in classifying AT maps, and 95% accuracy in identifying the propagation pattern with a mean spatial error of 1.5 mm in comparison to manual methods. These new methods will facilitate the efficient translation of gastrointestinal HR mapping techniques to clinical practice.

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Year:  2013        PMID: 24048711      PMCID: PMC3911879          DOI: 10.1007/s10439-013-0906-3

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  35 in total

Review 1.  Electrogastrography: a document prepared by the gastric section of the American Motility Society Clinical GI Motility Testing Task Force.

Authors:  H P Parkman; W L Hasler; J L Barnett; E Y Eaker
Journal:  Neurogastroenterol Motil       Date:  2003-04       Impact factor: 3.598

2.  Recurrent wavefront morphologies: a method for quantifying the complexity of epicardial activation patterns.

Authors:  J M Rogers; M Usui; B H KenKnight; R E Ideker; W M Smith
Journal:  Ann Biomed Eng       Date:  1997 Sep-Oct       Impact factor: 3.934

3.  An improved method for the estimation and visualization of velocity fields from gastric high-resolution electrical mapping.

Authors:  Niranchan Paskaranandavadivel; Gregory O'Grady; Peng Du; Andrew J Pullan; Leo K Cheng
Journal:  IEEE Trans Biomed Eng       Date:  2011-12-26       Impact factor: 4.538

4.  Rapid high-amplitude circumferential slow wave propagation during normal gastric pacemaking and dysrhythmias.

Authors:  G O'Grady; P Du; N Paskaranandavadivel; T R Angeli; W J E P Lammers; S J Asirvatham; J A Windsor; G Farrugia; A J Pullan; L K Cheng
Journal:  Neurogastroenterol Motil       Date:  2012-07       Impact factor: 3.598

5.  Comparison of filtering methods for extracellular gastric slow wave recordings.

Authors:  Niranchan Paskaranandavadivel; Gregory O'Grady; Peng Du; Leo K Cheng
Journal:  Neurogastroenterol Motil       Date:  2012-09-13       Impact factor: 3.598

6.  A framework for the online analysis of multi-electrode gastric slow wave recordings.

Authors:  Simon H Bull; Greg O'Grady; Leo K Cheng; Andrew J Pullan
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

7.  Quantification of velocity anisotropy during gastric electrical arrhythmia.

Authors:  Peng Du; Greg O'Grady; Niranchan Paskaranandavadivel; Timothy R Angeli; Christopher Lahr; Thomas L Abell; Leo K Cheng; Andrew J Pullan
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

8.  Effects of ginger on motion sickness and gastric slow-wave dysrhythmias induced by circular vection.

Authors:  Han-Chung Lien; Wei Ming Sun; Yen-Hsueh Chen; Hyerang Kim; William Hasler; Chung Owyang
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2003-03       Impact factor: 4.052

Review 9.  Physiology and pathophysiology of the interstitial cells of Cajal: from bench to bedside. VI. Pathogenesis and therapeutic approaches to human gastric dysrhythmias.

Authors:  Chung Owyang; William L Hasler
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2002-07       Impact factor: 4.052

10.  Biophysically based modeling of the interstitial cells of cajal: current status and future perspectives.

Authors:  Rachel Lees-Green; Peng Du; Gregory O'Grady; Arthur Beyder; Gianrico Farrugia; Andrew J Pullan
Journal:  Front Physiol       Date:  2011-07-04       Impact factor: 4.566

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  8 in total

1.  Patterns of Abnormal Gastric Pacemaking After Sleeve Gastrectomy Defined by Laparoscopic High-Resolution Electrical Mapping.

Authors:  Rachel Berry; Leo K Cheng; Peng Du; Niranchan Paskaranandavadivel; Timothy R Angeli; Terence Mayne; Grant Beban; Gregory O'Grady
Journal:  Obes Surg       Date:  2017-08       Impact factor: 4.129

2.  Improved Visualization of Gastrointestinal Slow Wave Propagation Using a Novel Wavefront-Orientation Interpolation Technique.

Authors:  Terence P Mayne; Niranchan Paskaranandavadivel; Jonathan C Erickson; Gregory OGrady; Leo K Cheng; Timothy R Angeli
Journal:  IEEE Trans Biomed Eng       Date:  2018-02       Impact factor: 4.538

3.  ManoMap: an automated system for characterization of colonic propagating contractions recorded by high-resolution manometry.

Authors:  Niranchan Paskaranandavadivel; Anthony Y Lin; Leo K Cheng; Ian Bissett; Andrew Lowe; John Arkwright; Saeed Mollaee; Phil G Dinning; Gregory O'Grady
Journal:  Med Biol Eng Comput       Date:  2021-01-26       Impact factor: 2.602

4.  Multi-channel wireless mapping of gastrointestinal serosal slow wave propagation.

Authors:  N Paskaranandavadivel; R Wang; S Sathar; G O'Grady; L K Cheng; A Farajidavar
Journal:  Neurogastroenterol Motil       Date:  2015-01-20       Impact factor: 3.598

5.  Detection of the Recovery Phase of in vivo gastric slow wave recordings.

Authors:  Niranchan Paskaranandavadivel; Xingzheng Pan; Peng Du; Gregory O'Grady; Leo K Cheng
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

6.  Extending the automated gastrointestinal analysis pipeline: Removal of invalid slow wave marks in gastric serosal recordings.

Authors:  Niranchan Paskaranandavadivel; Peng Du; Jonathan Erickson; Gregory O'Grady; Leo K Cheng
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

7.  Iterative Covariance-Based Removal of Time-Synchronous Artifacts: Application to Gastrointestinal Electrical Recordings.

Authors:  Jonathan C Erickson; Joy Putney; Douglas Hilbert; Niranchan Paskaranandavadivel; Leo K Cheng; Greg O'Grady; Timothy R Angeli
Journal:  IEEE Trans Biomed Eng       Date:  2016-01-26       Impact factor: 4.538

8.  Time-Delay Mapping of High-Resolution Gastric Slow-Wave Activity.

Authors:  Niranchan Paskaranandavadivel; Gregory OGrady; Leo K Cheng
Journal:  IEEE Trans Biomed Eng       Date:  2016-04-07       Impact factor: 4.538

  8 in total

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