Literature DB >> 20022985

Integration of proteomic-based tools for improved biomarkers of myocardial injury.

Robert E Gerszten1, Steven A Carr, Marc Sabatine.   

Abstract

BACKGROUND: Given the mounting evidence in favor of early pharmacologic and catheter-based interventions for patients across the spectrum of acute coronary syndromes, discovering novel diagnostically sensitive and specific biomarkers that provide biochemical proof of early or reversible myocardial injury could have a substantial positive impact on patient care. CONTENT: To address unmet needs in disease biomarkers, investigators have turned to proteomics approaches. We describe advances in proteomics discovery technologies based on liquid chromatography-tandem mass spectrometry that facilitate the unbiased analysis of low-abundance blood proteins. We detail the development of emerging techniques to enhance the biomarker verification process, such as accurate inclusion mass screening, stable isotope dilution-multiple reaction monitoring-mass spectrometry (SID-MRM-MS), and stable isotope standards with capture by antipeptide antibodies, which combines the advantages of specific immunoaffinity enrichment of a target peptide with the structural specificity and quantitative capabilities of SID-MRM-MS. We highlight new assays incorporating these techniques for troponin I, a representative low-abundance cardiac biomarker, and interleukin-33, an emerging novel marker of myocardial stress for which no existing ELISA exists. We demonstrate that troponin I and interleukin-33 peptides have a linear, dynamic range spanning 4 orders of magnitude and limits of detection of approximately 0.5 microg/L back-calculated to the protein concentration.
CONCLUSIONS: There remain important unmet diagnostic and prognostic needs in cardiology. Advances in technology may allow proteomics to play a vital role in the discovery and validation of novel biomarkers to help fill those needs.

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Year:  2009        PMID: 20022985     DOI: 10.1373/clinchem.2009.127878

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


  15 in total

1.  Synthetic peptide arrays for pathway-level protein monitoring by liquid chromatography-tandem mass spectrometry.

Authors:  Johannes A Hewel; Jian Liu; Kento Onishi; Vincent Fong; Shamanta Chandran; Jonathan B Olsen; Oxana Pogoutse; Mike Schutkowski; Holger Wenschuh; Dirk F H Winkler; Larry Eckler; Peter W Zandstra; Andrew Emili
Journal:  Mol Cell Proteomics       Date:  2010-05-13       Impact factor: 5.911

Review 2.  Proteomics: a pragmatic perspective.

Authors:  Parag Mallick; Bernhard Kuster
Journal:  Nat Biotechnol       Date:  2010-07-09       Impact factor: 54.908

Review 3.  Application of proteomics to cerebrovascular disease.

Authors:  Mingming Ning; Mary Lopez; Jing Cao; Ferdinando S Buonanno; Eng H Lo
Journal:  Electrophoresis       Date:  2012-12       Impact factor: 3.535

Review 4.  Quantitative proteomics in cardiovascular research: global and targeted strategies.

Authors:  Xiaomeng Shen; Rebeccah Young; John M Canty; Jun Qu
Journal:  Proteomics Clin Appl       Date:  2014-07-14       Impact factor: 3.494

Review 5.  Reconstructing the pipeline by introducing multiplexed multiple reaction monitoring mass spectrometry for cancer biomarker verification: an NCI-CPTC initiative perspective.

Authors:  Henry Rodriguez; Robert Rivers; Christopher Kinsinger; Mehdi Mesri; Tara Hiltke; Amir Rahbar; Emily Boja
Journal:  Proteomics Clin Appl       Date:  2010-11-22       Impact factor: 3.494

Review 6.  The path to clinical proteomics research: integration of proteomics, genomics, clinical laboratory and regulatory science.

Authors:  Emily S Boja; Henry Rodriguez
Journal:  Korean J Lab Med       Date:  2011-04

7.  A positive/negative ion-switching, targeted mass spectrometry-based metabolomics platform for bodily fluids, cells, and fresh and fixed tissue.

Authors:  Min Yuan; Susanne B Breitkopf; Xuemei Yang; John M Asara
Journal:  Nat Protoc       Date:  2012-04-12       Impact factor: 13.491

8.  Identification of follistatin-like 1 by expression cloning as an activator of the growth differentiation factor 15 gene and a prognostic biomarker in acute coronary syndrome.

Authors:  Christian Widera; Evangelos Giannitsis; Tibor Kempf; Mortimer Korf-Klingebiel; Beate Fiedler; Sarita Sharma; Hugo A Katus; Yasuhide Asaumi; Masayuki Shimano; Kenneth Walsh; Kai C Wollert
Journal:  Clin Chem       Date:  2012-06-06       Impact factor: 8.327

9.  Skeletal muscle proteomics: current approaches, technical challenges and emerging techniques.

Authors:  Kay Ohlendieck
Journal:  Skelet Muscle       Date:  2011-02-01       Impact factor: 4.912

10.  Cardiac phosphoproteomics during remote ischemic preconditioning: a role for the sarcomeric Z-disk proteins.

Authors:  Safa Abdul-Ghani; Kate J Heesom; Gianni D Angelini; M-Saadeh Suleiman
Journal:  Biomed Res Int       Date:  2014-03-30       Impact factor: 3.411

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