Literature DB >> 20016767

A Case Study in Pharmacologic Colon Imaging Using Principal Curves in Single Photon Emission Computed Tomography.

Brian S Caffo, Ciprian M Crainiceanu, Lijuan Deng, Craig W Hendrix.   

Abstract

In this manuscript we are concerned with functional imaging of the colon to assess the kinetics of microbicide lubricants. The overarching goal is to understand the distribution of the lubricants in the colon. Such information is crucial for understanding the potential impact of the microbicide on HIV viral transmission. The experiment was conducted by imaging a radiolabeled lubricant distributed in the subject's colon. The tracer imaging was conducted via single photon emission computed tomography (SPECT), a non-invasive, in-vivo functional imaging technique. We develop a novel principal curve algorithm to construct a three dimensional curve through the colon images. The developed algorithm is tested and debugged on several difficult two-dimensional images of familiar curves where the original principal curve algorithm does not apply. The final curve fit to the colon data is compared with experimental sigmoidoscope collection.

Entities:  

Year:  2008        PMID: 20016767      PMCID: PMC2794148          DOI: 10.1198/016214508000000832

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  4 in total

1.  Computing the centerline of a colon: a robust and efficient method based on 3D skeletons.

Authors:  Y Ge; D R Stelts; J Wang; D J Vining
Journal:  J Comput Assist Tomogr       Date:  1999 Sep-Oct       Impact factor: 1.826

2.  Fast extraction of minimal paths in 3D images and applications to virtual endoscopy.

Authors:  T Deschamps; L D Cohen
Journal:  Med Image Anal       Date:  2001-12       Impact factor: 8.545

3.  Accelerated image reconstruction using ordered subsets of projection data.

Authors:  H M Hudson; R S Larkin
Journal:  IEEE Trans Med Imaging       Date:  1994       Impact factor: 10.048

4.  Spiral computed tomographic colonography: determination of the central axis and digital unraveling of the colon.

Authors:  E G McFarland; G Wang; J A Brink; D M Balfe; J P Heiken; M W Vannier
Journal:  Acad Radiol       Date:  1997-05       Impact factor: 3.173

  4 in total
  9 in total

1.  Quantification of the spatial distribution of rectally applied surrogates for microbicide and semen in colon with SPECT and magnetic resonance imaging.

Authors:  Ying J Cao; Brian S Caffo; Edward J Fuchs; Linda A Lee; Yong Du; Liye Li; Rahul P Bakshi; Katarzyna Macura; Wasif A Khan; Richard L Wahl; Lisa A Grohskopf; Craig W Hendrix
Journal:  Br J Clin Pharmacol       Date:  2012-12       Impact factor: 4.335

2.  Simultaneous Evaluation of Safety, Acceptability, Pericoital Kinetics, and Ex Vivo Pharmacodynamics Comparing Four Rectal Microbicide Vehicle Candidates.

Authors:  Francisco Leyva; Edward J Fuchs; Rahul Bakshi; Alex Carballo-Dieguez; Ana Ventuneac; Chen Yue; Brian Caffo; Yong Du; Michael Torbenson; Liye Li; Gerald Mullin; Linda Lee; Lisa Rohan; Peter A Anton; Craig W Hendrix
Journal:  AIDS Res Hum Retroviruses       Date:  2015-07-08       Impact factor: 2.205

3.  NONLINEAR TUBE-FITTING FOR THE ANALYSIS OF ANATOMICAL AND FUNCTIONAL STRUCTURES.

Authors:  Jeff Goldsmith; Brian Caffo; Ciprian Crainiceanu; Daniel Reich; Yong Du; Craig Hendrix
Journal:  Ann Appl Stat       Date:  2011-01-01       Impact factor: 2.083

4.  Parametrization of white matter manifold-like structures using principal surfaces.

Authors:  Chen Yue; Vadim Zipunnikov; Pierre-Louis Bazin; Dzung Pham; Daniel Reich; Ciprian Crainiceanu; Brian Caffo
Journal:  J Am Stat Assoc       Date:  2016-10-18       Impact factor: 5.033

5.  A Comparative Pre-Phase I Study of the Impact of Gel Vehicle Volume on Distal Colon Distribution, User Experience, and Acceptability.

Authors:  Ethel D Weld; Hiwot Hiruy; Kate Morrow Guthrie; Joseph L Fava; Sara E Vargas; Karen Buckheit; Robert Buckheit; Hans Spiegel; Jennifer Breakey; Edward J Fuchs; Craig W Hendrix
Journal:  AIDS Res Hum Retroviruses       Date:  2016-12-13       Impact factor: 2.205

6.  A Phase 1 Randomized, Blinded Comparison of the Pharmacokinetics and Colonic Distribution of Three Candidate Rectal Microbicide Formulations of Tenofovir 1% Gel with Simulated Unprotected Sex (CHARM-02).

Authors:  Hiwot Hiruy; Edward J Fuchs; Mark A Marzinke; Rahul P Bakshi; Jennifer C Breakey; Wutyi S Aung; Madhuri Manohar; Chen Yue; Brian S Caffo; Yong Du; Kaleab Z Abebe; Hans M L Spiegel; Lisa C Rohan; Ian McGowan; Craig W Hendrix
Journal:  AIDS Res Hum Retroviruses       Date:  2015-08-24       Impact factor: 2.205

7.  Isoosmolar enemas demonstrate preferential gastrointestinal distribution, safety, and acceptability compared with hyperosmolar and hypoosmolar enemas as a potential delivery vehicle for rectal microbicides.

Authors:  Francisco J Leyva; Rahul P Bakshi; Edward J Fuchs; Liye Li; Brian S Caffo; Arthur J Goldsmith; Ana Ventuneac; Alex Carballo-Diéguez; Yong Du; Jeffrey P Leal; Linda A Lee; Michael S Torbenson; Craig W Hendrix
Journal:  AIDS Res Hum Retroviruses       Date:  2013-08-24       Impact factor: 2.205

8.  Examining the Safety, Pharmacokinetics, and Pharmacodynamics of a Rectally Administered IQP-0528 Gel for HIV Pre-Exposure Prophylaxis: A First-In-Human Study.

Authors:  Amer Al-Khouja; Eugenie Shieh; Edward J Fuchs; Mark A Marzinke; Rahul P Bakshi; Pamela Hummert; Anthony S Ham; Karen W Buckheit; Jennifer Breakey; Ethel D Weld; Huan Chen; Brian S Caffo; Robert W Buckheit; Craig W Hendrix
Journal:  AIDS Res Hum Retroviruses       Date:  2021-01-25       Impact factor: 1.723

9.  Anatomical curve identification.

Authors:  Adrian W Bowman; Stanislav Katina; Joanna Smith; Denise Brown
Journal:  Comput Stat Data Anal       Date:  2015-06       Impact factor: 1.681

  9 in total

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