Literature DB >> 2001671

Time-resolved X-ray diffraction study of structural changes associated with the photocycle of bacteriorhodopsin.

M H Koch1, N A Dencher, D Oesterhelt, H J Plöhn, G Rapp, G Büldt.   

Abstract

The time course of structural changes accompanying the transition from the M412 intermediate to the BR568 ground state in the photocycle of bacteriorhodopsin (BR) from Halobacterium halobium was studied at room temperature with a time resolution of 15 ms using synchrotron radiation X-ray diffraction. The M412 decay rate was slowed down by employing mutated BR Asp96Asn in purple membranes at two different pH-values. The observed light-induced intensity changes of in-plane X-ray reflections were fully reversible. For the mutated BR at neutral pH the kinetics of the structural alterations (tau 1/2 = 125 ms) were very similar to those of the optical changes characterizing the M412 decay, whereas at pH 9.6 the structural relaxation (tau 1/2 = 3 s) slightly lagged behind the absorbance changes at 410 nm. The overall X-ray intensity change between the M412 intermediate and the ground state was about 9% for the different samples investigated and is associated with electron density changes close to helix G, B and E. Similar changes (tau 1/2 = 1.3-3.6 s), which also confirm earlier neutron scattering results on the BR568 and M412 intermediates trapped at -180 degrees C, were observed with wild type BR retarded by 2 M guanidine hydrochloride (pH 9.4). The results unequivocally prove that the tertiary structure of BR changes during the photocycle.

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Year:  1991        PMID: 2001671      PMCID: PMC452679          DOI: 10.1002/j.1460-2075.1991.tb07978.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  16 in total

1.  High-sensitivity neutron diffraction of membranes: Location of the Schiff base end of the chromophore of bacteriorhodopsin.

Authors:  M P Heyn; J Westerhausen; I Wallat; F Seiff
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

2.  Large Scale Global Structural Changes of the Purple Membrane during the Photocycle.

Authors:  J E Draheim; J Y Cassim
Journal:  Biophys J       Date:  1985-04       Impact factor: 4.033

3.  The role of back-reactions and proton uptake during the N----O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study.

Authors:  J B Ames; R A Mathies
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

4.  Tertiary structure of bacteriorhodopsin. Positions and orientations of helices A and B in the structural map determined by neutron diffraction.

Authors:  J L Popot; D M Engelman; O Gurel; G Zaccaï
Journal:  J Mol Biol       Date:  1989-12-20       Impact factor: 5.469

5.  Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction.

Authors:  N A Dencher; D Dresselhaus; G Zaccai; G Büldt
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

6.  Bacteriorhodopsin mutants of Halobacterium sp. GRB. I. The 5-bromo-2'-deoxyuridine selection as a method to isolate point mutants in halobacteria.

Authors:  J Soppa; D Oesterhelt
Journal:  J Biol Chem       Date:  1989-08-05       Impact factor: 5.157

7.  Electron diffraction analysis of the M412 intermediate of bacteriorhodopsin.

Authors:  R M Glaeser; J Baldwin; T A Ceska; R Henderson
Journal:  Biophys J       Date:  1986-11       Impact factor: 4.033

8.  Time-resolved x-ray diffraction study of photostimulated purple membrane.

Authors:  R D Frankel; J M Forsyth
Journal:  Biophys J       Date:  1985-03       Impact factor: 4.033

9.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

10.  A defective proton pump, point-mutated bacteriorhodopsin Asp96----Asn is fully reactivated by azide.

Authors:  J Tittor; C Soell; D Oesterhelt; H J Butt; E Bamberg
Journal:  EMBO J       Date:  1989-11       Impact factor: 11.598

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  59 in total

Review 1.  Bioenergetics of the Archaea.

Authors:  G Schäfer; M Engelhard; V Müller
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

2.  Unraveling photoexcited conformational changes of bacteriorhodopsin by time resolved electron paramagnetic resonance spectroscopy.

Authors:  T Rink; M Pfeiffer; D Oesterhelt; K Gerwert; H J Steinhoff
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

3.  The effect of protein conformation change from alpha(II) to alpha(I) on the bacteriorhodopsin photocycle.

Authors:  J Wang; M A El-Sayed
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

4.  Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography.

Authors:  J Vonck
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

5.  Time-resolved x-ray diffraction reveals multiple conformations in the M-N transition of the bacteriorhodopsin photocycle.

Authors:  T Oka; N Yagi; T Fujisawa; H Kamikubo; F Tokunaga; M Kataoka
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

6.  Time-resolved X-ray diffraction reveals movement of F helix of D96N bacteriorhodopsin during M-MN transition at neutral pH.

Authors:  Toshihiko Oka; Naoto Yagi; Fumio Tokunaga; Mikio Kataoka
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

Review 7.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

Review 8.  A unifying concept for ion translocation by retinal proteins.

Authors:  D Oesterhelt; J Tittor; E Bamberg
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

9.  A residue substitution near the beta-ionone ring of the retinal affects the M substates of bacteriorhodopsin.

Authors:  G Váró; L Zimányi; M Chang; B Ni; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1992-03       Impact factor: 4.033

10.  Molecular mechanism of protein-retinal coupling in bacteriorhodopsin.

Authors:  J K Delaney; U Schweiger; S Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

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