Literature DB >> 20014789

Free solution hydrodynamic separation of DNA fragments from 75 to 106,000 base pairs in a single run.

Xiayan Wang1, Vijaykumar Veerappan, Chang Cheng, Xin Jiang, Randy D Allen, Purnendu K Dasgupta, Shaorong Liu.   

Abstract

Gel electrophoresis is commonly used to separate DNA, but narrow capillaries or microchannels desired for high throughput efficient separations are difficult to fill with gels. We report here that a narrow capillary can be used to hydrodynamically separate a wide size range of DNA fragments in a single run without the need for gels, wall coatings, or an electric field. We also demonstrate that attractive separation is possible in a few minutes and that the separated DNA can be collected into individual fractions that remain viable for amplification via the polymerase chain reaction.

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Year:  2010        PMID: 20014789     DOI: 10.1021/ja909233n

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

Review 1.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

Review 2.  Flow of DNA in micro/nanofluidics: From fundamentals to applications.

Authors:  Lea Rems; Durgesh Kawale; L James Lee; Pouyan E Boukany
Journal:  Biomicrofluidics       Date:  2016-07-20       Impact factor: 2.800

3.  Single Molecule Hydrodynamic Separation Allows Sensitive and Quantitative Analysis of DNA Conformation and Binding Interactions in Free Solution.

Authors:  Sarah M Friedrich; Kelvin J Liu; Tza-Huei Wang
Journal:  J Am Chem Soc       Date:  2015-12-31       Impact factor: 15.419

4.  Single-molecule analysis enables free solution hydrodynamic separation using yoctomole levels of DNA.

Authors:  Kelvin J Liu; Tushar D Rane; Yi Zhang; Tza-Huei Wang
Journal:  J Am Chem Soc       Date:  2011-04-19       Impact factor: 15.419

5.  High efficiency hydrodynamic chromatography in micro- and sub-micrometer deep channels using an on-chip pressure-generation unit.

Authors:  Ling Xia; Debashis Dutta
Journal:  Anal Chim Acta       Date:  2016-11-12       Impact factor: 6.558

6.  Resolving DNA at efficiencies of more than a million plates per meter using bare narrow open capillaries without sieving matrices.

Authors:  Zaifang Zhu; Lei Liu; Wei Wang; Joann J Lu; Xiayan Wang; Shaorong Liu
Journal:  Chem Commun (Camb)       Date:  2013-04-11       Impact factor: 6.222

7.  Simultaneously sizing and quantitating zeptomole-level DNA at high throughput in free solution.

Authors:  Zaifang Zhu; Huang Chen; Apeng Chen; Joann J Lu; Shaorong Liu; Meiping Zhao
Journal:  Chemistry       Date:  2014-09-15       Impact factor: 5.236

8.  Versatile Analysis of DNA-Biomolecule Interactions in Solution by Hydrodynamic Separation and Single Molecule Detection.

Authors:  Sarah M Friedrich; Rachel Bang; Andrew Li; Tza-Huei Wang
Journal:  Anal Chem       Date:  2019-02-06       Impact factor: 8.008

9.  Charged Polymers Transport under Applied Electric Fields in Periodic Channels.

Authors:  Sorin Nedelcu; Jens-Uwe Sommer
Journal:  Materials (Basel)       Date:  2013-07-19       Impact factor: 3.623

10.  Intact living-cell electrolaunching ionization mass spectrometry for single-cell metabolomics.

Authors:  Yunlong Shao; Yingyan Zhou; Yuanxing Liu; Wenmei Zhang; Guizhen Zhu; Yaoyao Zhao; Qi Zhang; Huan Yao; Hansen Zhao; Guangsheng Guo; Sichun Zhang; Xinrong Zhang; Xiayan Wang
Journal:  Chem Sci       Date:  2022-06-17       Impact factor: 9.969

  10 in total

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