Literature DB >> 20010952

Mass spectrometry tools for the classification and identification of bacteria.

Sascha Sauer1, Magdalena Kliem.   

Abstract

Mass spectrometry has become an important analytical tool in biology in the past two decades. In principle, mass spectrometry offers high-throughput, sensitive and specific analysis for many applications in microbiology, including clinical diagnostics and environmental research. Recently, several mass spectrometry methods for the classification and identification of bacteria and other microorganisms, as well as new software analysis tools, have been developed. In this Review we discuss the application range of these mass spectrometry procedures and their potential for successful transfer into microbiology laboratories.

Mesh:

Year:  2010        PMID: 20010952     DOI: 10.1038/nrmicro2243

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  82 in total

1.  Base-specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification.

Authors:  Friedrich von Wintzingerode; Sebastian Böcker; Cord Schlötelburg; Norman H L Chiu; Niels Storm; Christian Jurinke; Charles R Cantor; Ulf B Göbel; Dirk van den Boom
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

Review 2.  Characterization of intact microorganisms by MALDI mass spectrometry.

Authors:  C Fenselau; P A Demirev
Journal:  Mass Spectrom Rev       Date:  2001 Jul-Aug       Impact factor: 10.946

Review 3.  MALDI-TOF mass spectrometry of bacteria.

Authors:  J O Lay
Journal:  Mass Spectrom Rev       Date:  2001 Jul-Aug       Impact factor: 10.946

4.  A highly efficient and automated method of purifying and desalting PCR products for analysis by electrospray ionization mass spectrometry.

Authors:  Yun Jiang; Steven A Hofstadler
Journal:  Anal Biochem       Date:  2003-05-01       Impact factor: 3.365

5.  Direct bacterial profiling by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry for identification of pathogenic Neisseria.

Authors:  Elena N Ilina; Alexandra D Borovskaya; Maja M Malakhova; Vladimir A Vereshchagin; Anna A Kubanova; Alexander N Kruglov; Tatyana S Svistunova; Anaida O Gazarian; Thomas Maier; Markus Kostrzewa; Vadim M Govorun
Journal:  J Mol Diagn       Date:  2008-12-18       Impact factor: 5.568

6.  EPoS: a modular software framework for phylogenetic analysis.

Authors:  Thasso Griebel; Malte Brinkmeyer; Sebastian Böcker
Journal:  Bioinformatics       Date:  2008-07-16       Impact factor: 6.937

7.  Electrospray wings for molecular elephants (Nobel lecture).

Authors:  John B Fenn
Journal:  Angew Chem Int Ed Engl       Date:  2003-08-25       Impact factor: 15.336

8.  Automated comparative sequence analysis by base-specific cleavage and mass spectrometry for nucleic acid-based microbial typing.

Authors:  Christiane Honisch; Yong Chen; Chloe Mortimer; Catherine Arnold; Oliver Schmidt; Dirk van den Boom; Charles R Cantor; Haroun N Shah; Saheer E Gharbia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-11       Impact factor: 11.205

9.  Interaction of bacteria and ion-exchange particles and its potential in separation for matrix-assisted laser desorption/ionization mass spectrometric identification of bacteria in water.

Authors:  Zhongxian Guo; Ying Liu; Shuping Li; Zhaoguang Yang
Journal:  Rapid Commun Mass Spectrom       Date:  2009-12       Impact factor: 2.419

10.  Classification and identification of bacteria by mass spectrometry and computational analysis.

Authors:  Sascha Sauer; Anja Freiwald; Thomas Maier; Michael Kube; Richard Reinhardt; Markus Kostrzewa; Klaus Geider
Journal:  PLoS One       Date:  2008-07-30       Impact factor: 3.240

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  97 in total

1.  Rapid genus- and species-specific identification of Cronobacter spp. by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Roger Stephan; Dominik Ziegler; Valentin Pflüger; Guido Vogel; Angelika Lehner
Journal:  J Clin Microbiol       Date:  2010-06-16       Impact factor: 5.948

2.  Comparison of Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometer to BD Phoenix automated microbiology system for identification of gram-negative bacilli.

Authors:  Ryan T Saffert; Scott A Cunningham; Sherry M Ihde; Kristine E Monson Jobe; Jayawant Mandrekar; Robin Patel
Journal:  J Clin Microbiol       Date:  2011-01-05       Impact factor: 5.948

3.  Assessment of marker proteins identified in whole cell extracts for bacterial speciation using liquid chromatography electrospray ionization tandem mass spectrometry.

Authors:  Jennifer Kooken; Karen Fox; Alvin Fox; David Wunschel
Journal:  Mol Cell Probes       Date:  2013-08-29       Impact factor: 2.365

4.  FAST: Rapid determinations of antibiotic susceptibility phenotypes using label-free cytometry.

Authors:  Tzu-Hsueh Huang; Yih-Ling Tzeng; Robert M Dickson
Journal:  Cytometry A       Date:  2018-05-07       Impact factor: 4.355

5.  Performances of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for rapid identification of bacteria in routine clinical microbiology.

Authors:  Damien Dubois; Marion Grare; Marie-Françoise Prere; Christine Segonds; Nicole Marty; Eric Oswald
Journal:  J Clin Microbiol       Date:  2012-05-16       Impact factor: 5.948

6.  MALDI biotyper-based rapid resistance detection by stable-isotope labeling.

Authors:  Katrin Sparbier; Christoph Lange; Jette Jung; Andreas Wieser; Sören Schubert; Markus Kostrzewa
Journal:  J Clin Microbiol       Date:  2013-09-04       Impact factor: 5.948

Review 7.  [Areas of application of isothermal microcalorimetry in urology: an overview].

Authors:  G Bonkat; D Wirz; M Rieken; T C Gasser; A Bachmann; O Braissant
Journal:  Urologe A       Date:  2013-08       Impact factor: 0.639

8.  Efficient sample preparation in immuno-matrix-assisted laser desorption/ionization mass spectrometry using acoustic trapping.

Authors:  Björn Hammarström; Hong Yan; Johan Nilsson; Simon Ekström
Journal:  Biomicrofluidics       Date:  2013-03-28       Impact factor: 2.800

9.  Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification of Beta-hemolytic streptococci.

Authors:  Abdessalam Cherkaoui; Stéphane Emonet; José Fernandez; Didier Schorderet; Jacques Schrenzel
Journal:  J Clin Microbiol       Date:  2011-06-22       Impact factor: 5.948

10.  Bacterial classification of fish-pathogenic Mycobacterium species by multigene phylogenetic analyses and MALDI Biotyper identification system.

Authors:  Satoru Kurokawa; Jun Kabayama; Tsuguaki Fukuyasu; Seong Don Hwang; Chan-Il Park; Seong-Bin Park; Carmelo S del Castillo; Jun-ichi Hikima; Tae-Sung Jung; Hidehiro Kondo; Ikuo Hirono; Haruko Takeyama; Takashi Aoki
Journal:  Mar Biotechnol (NY)       Date:  2012-11-16       Impact factor: 3.619

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