Literature DB >> 20008879

Genome-wide association studies: what do they teach us about asthma and chronic obstructive pulmonary disease?

H Marike Boezen1.   

Abstract

Genome-wide association (GWA) studies are applied to identify novel genetic variants that are associated with disease. Results of the first three GWA studies on asthma identified susceptibility genes for asthma as ORMDL3, IL1RL1, and PDE4D. The first GWA study on chronic obstructive pulmonary disease (COPD) identified two single nucleotide polymorphisms at the alpha-nicotinic acetylcholine receptor (CHRNA 3/5) locus, identified earlier as risk factor for both lung cancer and nicotine dependence, to be associated with COPD. GWA studies have been shown to be relevant study designs that brought us new insight and identified novel genetic factors for asthma and COPD, but future studies should take environmental factors into account and proceed with more in-depth studies on functionality of the identified variants and their impact on public health.

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Year:  2009        PMID: 20008879     DOI: 10.1513/pats.200907-058DP

Source DB:  PubMed          Journal:  Proc Am Thorac Soc        ISSN: 1546-3222


  14 in total

1.  CGene: an R package for implementation of causal genetic analyses.

Authors:  Peter J Lipman; Christoph Lange
Journal:  Eur J Hum Genet       Date:  2011-07-06       Impact factor: 4.246

Review 2.  Environmental epigenetics of asthma: an update.

Authors:  Shuk-Mei Ho
Journal:  J Allergy Clin Immunol       Date:  2010-09       Impact factor: 10.793

3.  Nicotinic acetylcholine receptor variants are related to smoking habits, but not directly to COPD.

Authors:  Simona E Budulac; Judith M Vonk; Dirkje S Postma; Mateusz Siedlinski; Wim Timens; Marike H Boezen
Journal:  PLoS One       Date:  2012-03-15       Impact factor: 3.240

Review 4.  Association between β2-Adrenergic Receptor-16Arg/Gly Gene Polymorphism and Chronic Obstructive Pulmonary Disease Risk:Systematic Review and Meta-Analysis.

Authors:  Wei Wang; Ping Li; Yifei Chen; Jiong Yang
Journal:  Iran J Public Health       Date:  2014-07       Impact factor: 1.429

5.  Nicotine Inhibits Cisplatin-Induced Apoptosis via Regulating α5-nAChR/AKT Signaling in Human Gastric Cancer Cells.

Authors:  Yanfei Jia; Haiji Sun; Hongqiao Wu; Huilin Zhang; Xiuping Zhang; Dongjie Xiao; Xiaoli Ma; Yunshan Wang
Journal:  PLoS One       Date:  2016-02-24       Impact factor: 3.240

6.  No convincing association between genetic markers and respiratory symptoms: results of a GWA study.

Authors:  Xiang Zeng; Judith M Vonk; Kim de Jong; Xijin Xu; Xia Huo; H Marike Boezen
Journal:  Respir Res       Date:  2017-01-10

7.  Genes and pathways underlying susceptibility to impaired lung function in the context of environmental tobacco smoke exposure.

Authors:  K de Jong; J M Vonk; M Imboden; L Lahousse; A Hofman; G G Brusselle; N M Probst-Hensch; D S Postma; H M Boezen
Journal:  Respir Res       Date:  2017-07-24

8.  COPD GWAS variant at 19q13.2 in relation with DNA methylation and gene expression.

Authors:  Ivana Nedeljkovic; Lies Lahousse; Elena Carnero-Montoro; Alen Faiz; Judith M Vonk; Kim de Jong; Diana A van der Plaat; Cleo C van Diemen; Maarten van den Berge; Ma'en Obeidat; Yohan Bossé; David C Nickle; B I O S Consortium; Andre G Uitterlinden; Joyce B J van Meurs; Bruno H C Stricker; Guy G Brusselle; Dirkje S Postma; H Marike Boezen; Cornelia M van Duijn; Najaf Amin
Journal:  Hum Mol Genet       Date:  2018-01-15       Impact factor: 6.150

9.  Smoking dysregulates the human airway basal cell transcriptome at COPD risk locus 19q13.2.

Authors:  Dorothy M Ryan; Thomas L Vincent; Jacqueline Salit; Matthew S Walters; Francisco Agosto-Perez; Renat Shaykhiev; Yael Strulovici-Barel; Robert J Downey; Lauren J Buro-Auriemma; Michelle R Staudt; Neil R Hackett; Jason G Mezey; Ronald G Crystal
Journal:  PLoS One       Date:  2014-02-03       Impact factor: 3.240

10.  Association of IREB2 Gene rs2568494 Polymorphism with Risk of Chronic Obstructive Pulmonary Disease: A Meta-Analysis.

Authors:  Yiming Du; Yuwen Xue; Wei Xiao
Journal:  Med Sci Monit       Date:  2016-01-18
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