Literature DB >> 20008122

Gradient, contact-free volume transfers minimize compound loss in dose-response experiments.

David Harris1, Joe Olechno, Sammy Datwani, Richard Ellson.   

Abstract

More accurate dose-response curves can be constructed by eliminating aqueous serial dilution of compounds. Traditional serial dilutions that use aqueous diluents can result in errors in dose-response values of up to 4 orders of magnitude for a significant percentage of a compound library. When DMSO is used as the diluent, the errors are reduced but not eliminated. The authors use acoustic drop ejection (ADE) to transfer different volumes of model library compounds, directly creating a concentration gradient series in the receiver assay plate. Sample losses and contamination associated with compound handling are therefore avoided or minimized, particularly in the case of less water-soluble compounds. ADE is particularly well suited for assay miniaturization, but gradient volume dispensing is not limited to miniaturized applications.

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Year:  2009        PMID: 20008122     DOI: 10.1177/1087057109351027

Source DB:  PubMed          Journal:  J Biomol Screen        ISSN: 1087-0571


  7 in total

1.  Thermodynamic Proxies to Compensate for Biases in Drug Discovery Methods.

Authors:  Sean Ekins; Nadia K Litterman; Christopher A Lipinski; Barry A Bunin
Journal:  Pharm Res       Date:  2015-08-27       Impact factor: 4.200

2.  Log-scale dose response of inhibitors on a chip.

Authors:  Jae Young Yun; Sachin Jambovane; Se-Kwon Kim; Sung-Hak Cho; Evert C Duin; Jong Wook Hong
Journal:  Anal Chem       Date:  2011-07-19       Impact factor: 6.986

3.  Automated Acoustic Dispensing for the Serial Dilution of Peptide Agonists in Potency Determination Assays.

Authors:  Jacqueline Naylor; Alessandra Rossi; Christopher Brankin; David C Hornigold
Journal:  J Vis Exp       Date:  2016-11-10       Impact factor: 1.355

4.  An alternative direct compound dispensing method using the HP D300 digital dispenser.

Authors:  Raisa E Jones; Wei Zheng; John C McKew; Catherine Z Chen
Journal:  J Lab Autom       Date:  2013-05-24

5.  Modeling error in experimental assays using the bootstrap principle: understanding discrepancies between assays using different dispensing technologies.

Authors:  Sonya M Hanson; Sean Ekins; John D Chodera
Journal:  J Comput Aided Mol Des       Date:  2015-12-17       Impact factor: 3.686

6.  Dispensing processes impact apparent biological activity as determined by computational and statistical analyses.

Authors:  Sean Ekins; Joe Olechno; Antony J Williams
Journal:  PLoS One       Date:  2013-05-01       Impact factor: 3.240

7.  Using sound pulses to solve the crystal-harvesting bottleneck.

Authors:  Yasmin N Samara; Haley M Brennan; Liam McCarthy; Mary T Bollard; Denise Laspina; Jakub M Wlodek; Stefanie L Campos; Ramya Natarajan; Kazimierz Gofron; Sean McSweeney; Alexei S Soares; Ludmila Leroy
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-10-02       Impact factor: 7.652

  7 in total

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