Literature DB >> 20001315

Phylogenetic analysis of HIV sequences obtained in a respondent-driven sampling study of men who have sex with men.

Snjezana Zidovec Lepej1, Ivana Baca Vrakela, Mario Poljak, Ivana Bozicevic, Josip Begovac.   

Abstract

The presence of transmission clusters and their relationship to the recruitment chain were investigated in an HIV prevalence assessment survey using respondent-driven sampling among men who had sex with men (MSM) in Zagreb, Croatia. HIV infection was found in 18 of 360 participants. Five individuals belong to a transmission cluster of MSM infected with phylogenetically related HIV. All were recruited in later waves (fourth to ninth), suggesting that the population is sexually networked.

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Year:  2009        PMID： 20001315     DOI： 10.1089/aid.2009.0130

Source DB:  PubMed          Journal:  AIDS Res Hum Retroviruses        ISSN： 0889-2229            Impact factor:   2.205


  8 in total

1.  HIV Response Interventions that Integrate HIV Molecular Cluster and Social Network Analysis: A Systematic Review.

Authors:  Daniel J Gore; Kellie Schueler; Santhoshini Ramani; Arno Uvin; Gregory Phillips; Moira McNulty; Kayo Fujimoto; John Schneider
Journal:  AIDS Behav       Date:  2021-11-15

2.  The prevalence of transmitted drug resistance in newly diagnosed HIV-infected individuals in Croatia: the role of transmission clusters of men who have sex with men carrying the T215S surveillance drug resistance mutation.

Authors:  Ivana Grgic; Snjezana Zidovec Lepej; Maja M Lunar; Mario Poljak; Adriana Vince; Ivana Baca Vrakela; Ana Planinic; Katja Seme; Josip Begovac
Journal:  AIDS Res Hum Retroviruses       Date:  2012-10-04       Impact factor: 2.205

3.  Social network-based recruitment successfully reveals HIV-1 transmission networks among high-risk individuals in El Salvador.

Authors:  Ann M Dennis; Wendy Murillo; Flor de Maria Hernandez; Maria Elena Guardado; Ana Isabel Nieto; Ivette Lorenzana de Rivera; Joseph J Eron; Gabriela Paz-Bailey
Journal:  J Acquir Immune Defic Syndr       Date:  2013-05-01       Impact factor: 3.731

4.  Molecular Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Infected Individuals in a Network-Based Intervention (Transmission Reduction Intervention Project): Phylogenetics Identify HIV-1-Infected Individuals With Social Links.

Authors:  Evangelia-Georgia Kostaki; Georgios K Nikolopoulos; Eirini Pavlitina; Leslie Williams; Gkikas Magiorkinis; John Schneider; Britt Skaathun; Ethan Morgan; Mina Psichogiou; Georgios L Daikos; Vana Sypsa; Pavlo Smyrnov; Ania Korobchuk; Meni Malliori; Angelos Hatzakis; Samuel R Friedman; Dimitrios Paraskevis
Journal:  J Infect Dis       Date:  2018-07-24       Impact factor: 5.226

5.  Genetic clustering analysis for HIV infection among MSM in Nigeria: implications for intervention.

Authors:  Yuruo Li; Hongjie Liu; Habib O Ramadhani; Nicaise Ndembi; Trevor A Crowell; Gustavo Kijak; Merlin L Robb; Julie A Ake; Afoke Kokogho; Rebecca G Nowak; Charlotte Gaydos; Stefan D Baral; Erik Volz; Sodsai Tovanabutra; Man Charurat
Journal:  AIDS       Date:  2020-02-01       Impact factor: 4.632

Review 6.  Defining HIV-1 transmission clusters based on sequence data.

Authors:  Amin S Hassan; Oliver G Pybus; Eduard J Sanders; Jan Albert; Joakim Esbjörnsson
Journal:  AIDS       Date:  2017-06-01       Impact factor: 4.177

Review 7.  A Systematic Review of Published Respondent-Driven Sampling Surveys Collecting Behavioral and Biologic Data.

Authors:  Lisa G Johnston; Avi J Hakim; Samantha Dittrich; Janet Burnett; Evelyn Kim; Richard G White
Journal:  AIDS Behav       Date:  2016-08

8.  Detailed molecular epidemiologic characterization of HIV-1 infection in Bulgaria reveals broad diversity and evolving phylodynamics.

Authors:  Ivailo Alexiev Ivanov; Danail Beshkov; Anupama Shankar; Debra L Hanson; Dimitrios Paraskevis; Viara Georgieva; Lyudmila Karamacheva; Hristo Taskov; Tonka Varleva; Ivaylo Elenkov; Mariana Stoicheva; Daniela Nikolova; William M Switzer
Journal:  PLoS One       Date:  2013-03-19       Impact factor: 3.240
  8 in total

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