Literature DB >> 19968789

Ribosome reactivation by replacement of damaged proteins.

Arto Pulk1, Aivar Liiv, Lauri Peil, Ulo Maiväli, Knud Nierhaus, Jaanus Remme.   

Abstract

Ribosomal functions are vital for all organisms. Bacterial ribosomes are stable 2.4 MDa particles composed of three RNAs and over 50 different proteins. Accumulating damage to ribosomal RNA or proteins can disturb ribosome functioning. Organisms could benefit from degrading or possibly repairing inactive or partially active ribosomes. Reactivation of chemically damaged ribosomes by a process of protein replacement was studied in vitro. Ribosomes were inactivated by chemical modification of Cys residues. Incubation of modified ribosomes with total ribosomal proteins led to reactivation of translational activity. Intriguingly, ribosomal proteins extracted by LiCl are equally active in the restoration of ribosome function. Incubation of 70S ribosomes with isotopically labelled r-proteins followed by separation of ribosomes was used to identify exchangeable proteins. A similar set of proteins was found to be exchanged in vivo under stress conditions in the stationary phase. We propose that repair of damaged ribosomes might be an important mechanism for maintaining protein synthesis activity following chemical damage.

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Year:  2009        PMID: 19968789     DOI: 10.1111/j.1365-2958.2009.07002.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  27 in total

1.  Single-molecule investigations of the stringent response machinery in living bacterial cells.

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-05       Impact factor: 11.205

2.  Ribosome degradation in growing bacteria.

Authors:  Kerli Piir; Anton Paier; Aivar Liiv; Tanel Tenson; Ulo Maiväli
Journal:  EMBO Rep       Date:  2011-04-01       Impact factor: 8.807

Review 3.  The frontier of RNA metamorphosis and ribosome signature in neocortical development.

Authors:  Matthew L Kraushar; Tatiana Popovitchenko; Nicole L Volk; Mladen-Roko Rasin
Journal:  Int J Dev Neurosci       Date:  2016-05-27       Impact factor: 2.457

4.  Invariable stoichiometry of ribosomal proteins in mouse brain tissues with aging.

Authors:  Susan Amirbeigiarab; Parnian Kiani; Ana Velazquez Sanchez; Christoph Krisp; Andriy Kazantsev; Lars Fester; Hartmut Schlüter; Zoya Ignatova
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-21       Impact factor: 11.205

5.  Initiation with elongator tRNAs.

Authors:  Laasya Samhita; Kai Virumäe; Jaanus Remme; Umesh Varshney
Journal:  J Bacteriol       Date:  2013-07-12       Impact factor: 3.490

6.  Subribosomal particle analysis reveals the stages of bacterial ribosome assembly at which rRNA nucleotides are modified.

Authors:  Triinu Siibak; Jaanus Remme
Journal:  RNA       Date:  2010-08-18       Impact factor: 4.942

7.  Measuring the dynamics of E. coli ribosome biogenesis using pulse-labeling and quantitative mass spectrometry.

Authors:  Stephen S Chen; Edit Sperling; Josh M Silverman; Joseph H Davis; James R Williamson
Journal:  Mol Biosyst       Date:  2012-10-30

8.  Characterization of the ribosome biogenesis landscape in E. coli using quantitative mass spectrometry.

Authors:  Stephen S Chen; James R Williamson
Journal:  J Mol Biol       Date:  2012-12-07       Impact factor: 5.469

Review 9.  Heterogeneity of the translational machinery: Variations on a common theme.

Authors:  Martina Sauert; Hannes Temmel; Isabella Moll
Journal:  Biochimie       Date:  2014-12-24       Impact factor: 4.079

Review 10.  Oxidative Stress in Bacteria and the Central Dogma of Molecular Biology.

Authors:  Michel Fasnacht; Norbert Polacek
Journal:  Front Mol Biosci       Date:  2021-05-10
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