Literature DB >> 19966221

DCP1 forms asymmetric trimers to assemble into active mRNA decapping complexes in metazoa.

Felix Tritschler1, Joerg E Braun, Carina Motz, Catia Igreja, Gabrielle Haas, Vincent Truffault, Elisa Izaurralde, Oliver Weichenrieder.   

Abstract

DCP1 stimulates the decapping enzyme DCP2, which removes the mRNA 5' cap structure committing mRNAs to degradation. In multicellular eukaryotes, DCP1-DCP2 interaction is stabilized by additional proteins, including EDC4. However, most information on DCP2 activation stems from studies in S. cerevisiae, which lacks EDC4. Furthermore, DCP1 orthologs from multicellular eukaryotes have a C-terminal extension, absent in fungi. Here, we show that in metazoa, a conserved DCP1 C-terminal domain drives DCP1 trimerization. Crystal structures of the DCP1-trimerization domain reveal an antiparallel assembly comprised of three kinked alpha-helices. Trimerization is required for DCP1 to be incorporated into active decapping complexes and for efficient mRNA decapping in vivo. Our results reveal an unexpected connectivity and complexity of the mRNA decapping network in multicellular eukaryotes, which likely enhances opportunities for regulating mRNA degradation.

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Year:  2009        PMID: 19966221      PMCID: PMC2789166          DOI: 10.1073/pnas.0909871106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Authors:  Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

2.  Crystal structure of Dcp1p and its functional implications in mRNA decapping.

Authors:  Meipei She; Carolyn J Decker; Kumar Sundramurthy; Yuying Liu; Nan Chen; Roy Parker; Haiwei Song
Journal:  Nat Struct Mol Biol       Date:  2004-02-01       Impact factor: 15.369

3.  Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping.

Authors:  Martin Fenger-Grøn; Christy Fillman; Bodil Norrild; Jens Lykke-Andersen
Journal:  Mol Cell       Date:  2005-12-22       Impact factor: 17.970

4.  More than 1 + 2 in mRNA decapping.

Authors:  Sophie Bail; Megerditch Kiledjian
Journal:  Nat Struct Mol Biol       Date:  2006-01       Impact factor: 15.369

5.  mRNA decapping is promoted by an RNA-binding channel in Dcp2.

Authors:  Mandar V Deshmukh; Brittnee N Jones; Duc-Uy Quang-Dang; Jeremy Flinders; Stephen N Floor; Candice Kim; Jacek Jemielity; Marcin Kalek; Edward Darzynkiewicz; John D Gross
Journal:  Mol Cell       Date:  2008-02-15       Impact factor: 17.970

6.  Decapping reaction of mRNA requires Dcp1 in fission yeast: its characterization in different species from yeast to human.

Authors:  Takeshi Sakuno; Yasuhiro Araki; Yuriko Ohya; Satoshi Kofuji; Shinya Takahashi; Shin-ichi Hoshino; Toshiaki Katada
Journal:  J Biochem       Date:  2004-12       Impact factor: 3.387

7.  A divergent Sm fold in EDC3 proteins mediates DCP1 binding and P-body targeting.

Authors:  Felix Tritschler; Ana Eulalio; Vincent Truffault; Marcus D Hartmann; Sigrun Helms; Steffen Schmidt; Murray Coles; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Mol Cell Biol       Date:  2007-10-08       Impact factor: 4.272

8.  Analysis of recombinant yeast decapping enzyme.

Authors:  Michelle Steiger; Anne Carr-Schmid; David C Schwartz; Megerditch Kiledjian; Roy Parker
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

9.  Structural basis of dcp2 recognition and activation by dcp1.

Authors:  Meipei She; Carolyn J Decker; Dmitri I Svergun; Adam Round; Nan Chen; Denise Muhlrad; Roy Parker; Haiwei Song
Journal:  Mol Cell       Date:  2008-02-15       Impact factor: 17.970

10.  Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae.

Authors:  Carolyn J Decker; Daniela Teixeira; Roy Parker
Journal:  J Cell Biol       Date:  2007-11-05       Impact factor: 10.539

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  34 in total

1.  Dehydration stress activates Arabidopsis MPK6 to signal DCP1 phosphorylation.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  EMBO J       Date:  2012-03-09       Impact factor: 11.598

2.  The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex.

Authors:  Simon A Fromm; Vincent Truffault; Julia Kamenz; Joerg E Braun; Niklas A Hoffmann; Elisa Izaurralde; Remco Sprangers
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

3.  Virus-induced translational arrest through 4EBP1/2-dependent decay of 5'-TOP mRNAs restricts viral infection.

Authors:  Kaycie C Hopkins; Michael A Tartell; Christin Herrmann; Brent A Hackett; Frances Taschuk; Debasis Panda; Sanjay V Menghani; Leah R Sabin; Sara Cherry
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

4.  A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5' exonucleolytic degradation.

Authors:  Joerg E Braun; Vincent Truffault; Andreas Boland; Eric Huntzinger; Chung-Te Chang; Gabrielle Haas; Oliver Weichenrieder; Murray Coles; Elisa Izaurralde
Journal:  Nat Struct Mol Biol       Date:  2012-11-11       Impact factor: 15.369

5.  mRNA decapping enzyme 1a (Dcp1a)-induced translational arrest through protein kinase R (PKR) activation requires the N-terminal enabled vasodilator-stimulated protein homology 1 (EVH1) domain.

Authors:  Jonathan D Dougherty; Lucas C Reineke; Richard E Lloyd
Journal:  J Biol Chem       Date:  2013-12-31       Impact factor: 5.157

6.  The NS1 protein of influenza A virus interacts with cellular processing bodies and stress granules through RNA-associated protein 55 (RAP55) during virus infection.

Authors:  Bobo Wing-Yee Mok; Wenjun Song; Pui Wang; Hung Tai; Yixin Chen; Min Zheng; Xi Wen; Siu-Ying Lau; Wai Lan Wu; Ken Matsumoto; Kwok-Yung Yuen; Honglin Chen
Journal:  J Virol       Date:  2012-09-12       Impact factor: 5.103

7.  Poliovirus-mediated disruption of cytoplasmic processing bodies.

Authors:  Jonathan D Dougherty; James P White; Richard E Lloyd
Journal:  J Virol       Date:  2010-10-20       Impact factor: 5.103

8.  Porcine Deltacoronavirus nsp5 Cleaves DCP1A To Decrease Its Antiviral Activity.

Authors:  Xinyu Zhu; Jiyao Chen; Liyuan Tian; Yanrong Zhou; Shangen Xu; Siwen Long; Dang Wang; Liurong Fang; Shaobo Xiao
Journal:  J Virol       Date:  2020-07-16       Impact factor: 5.103

Review 9.  Structural and functional control of the eukaryotic mRNA decapping machinery.

Authors:  Marcos Arribas-Layton; Donghui Wu; Jens Lykke-Andersen; Haiwei Song
Journal:  Biochim Biophys Acta       Date:  2012-12-31

10.  Tumor suppressor PNRC1 blocks rRNA maturation by recruiting the decapping complex to the nucleolus.

Authors:  Marco Gaviraghi; Claudia Vivori; Yerma Pareja Sanchez; Francesca Invernizzi; Angela Cattaneo; Benedetta Maria Santoliquido; Michela Frenquelli; Simona Segalla; Angela Bachi; Claudio Doglioni; Vicent Pelechano; Davide Cittaro; Giovanni Tonon
Journal:  EMBO J       Date:  2018-10-29       Impact factor: 11.598

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