Literature DB >> 19965420

The Palomero genome suggests metal effects on domestication.

Jean-Philippe Vielle-Calzada1, Octavio Martínez de la Vega, Gustavo Hernández-Guzmán, Enrique Ibarra-Laclette, Cesar Alvarez-Mejía, Julio C Vega-Arreguín, Beatriz Jiménez-Moraila, Araceli Fernández-Cortés, Guillermo Corona-Armenta, Luis Herrera-Estrella, Alfredo Herrera-Estrella.   

Abstract

Maize domestication (Zea mays ssp. mays L.) resulted in a wide diversity of native landraces that represent an invaluable source of genetic information for exploring natural variation and genome evolution. We sequenced de novo the approximately 2-gigabase genome of the Mexican landrace Palomero Toluqueño (Palomero) and compared its features to those of the modern inbred line B73. We revealed differences concordant with its ancient origin and identified chromosomal regions of low nucleotide variability that contain domestication genes involved in heavy-metal detoxification. Our results indicate that environmental changes were important selective forces acting on maize domestication.

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Year:  2009        PMID: 19965420     DOI: 10.1126/science.1178437

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  27 in total

1.  Genomics: Maize looks set to amaze.

Authors:  Mary Muers
Journal:  Nat Rev Genet       Date:  2010-01       Impact factor: 53.242

2.  From genomics to crop breeding.

Authors:  Richard Flavell
Journal:  Nat Biotechnol       Date:  2010-02       Impact factor: 54.908

Review 3.  Emerging knowledge from genome sequencing of crop species.

Authors:  Delfina Barabaschi; Davide Guerra; Katia Lacrima; Paolo Laino; Vania Michelotti; Simona Urso; Giampiero Valè; Luigi Cattivelli
Journal:  Mol Biotechnol       Date:  2012-03       Impact factor: 2.695

Review 4.  Phosphate deprivation in maize: genetics and genomics.

Authors:  Carlos Calderón-Vázquez; Ruairidh J H Sawers; Luis Herrera-Estrella
Journal:  Plant Physiol       Date:  2011-05-26       Impact factor: 8.340

5.  Perturbation of maize phenylpropanoid metabolism by an AvrE family type III effector from Pantoea stewartii.

Authors:  Jo Ann E Asselin; Jinshan Lin; Alvaro L Perez-Quintero; Irene Gentzel; Doris Majerczak; Stephen O Opiyo; Wanying Zhao; Seung-Mann Paek; Min Gab Kim; David L Coplin; Joshua J Blakeslee; David Mackey
Journal:  Plant Physiol       Date:  2015-01-29       Impact factor: 8.340

Review 6.  How important are transposons for plant evolution?

Authors:  Damon Lisch
Journal:  Nat Rev Genet       Date:  2013-01       Impact factor: 53.242

7.  Grande retrotransposons contain an accessory gene in the unusually long 3'-internal region that encodes a nuclear protein transcribed from its own promoter.

Authors:  Eva Gómez-Orte; Carlos M Vicient; José Antonio Martínez-Izquierdo
Journal:  Plant Mol Biol       Date:  2013-02-20       Impact factor: 4.076

8.  The earliest maize from San Marcos Tehuacán is a partial domesticate with genomic evidence of inbreeding.

Authors:  Miguel Vallebueno-Estrada; Isaac Rodríguez-Arévalo; Alejandra Rougon-Cardoso; Javier Martínez González; Angel García Cook; Rafael Montiel; Jean-Philippe Vielle-Calzada
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-21       Impact factor: 11.205

9.  Choosing a genome browser for a Model Organism Database: surveying the maize community.

Authors:  Taner Z Sen; Lisa C Harper; Mary L Schaeffer; Carson M Andorf; Trent E Seigfried; Darwin A Campbell; Carolyn J Lawrence
Journal:  Database (Oxford)       Date:  2010-07-06       Impact factor: 3.451

10.  Diverse roles of strigolactone signaling in maize architecture and the uncoupling of a branching-specific subnetwork.

Authors:  Jiahn Chou Guan; Karen E Koch; Masaharu Suzuki; Shan Wu; Susan Latshaw; Tanya Petruff; Charles Goulet; Harry J Klee; Donald R McCarty
Journal:  Plant Physiol       Date:  2012-09-06       Impact factor: 8.340

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