Literature DB >> 19954807

Euprosterna elaeasa virus genome sequence and evolution of the Tetraviridae family: emergence of bipartite genomes and conservation of the VPg signal with the dsRNA Birnaviridae family.

Jean-Louis Zeddam1, Karl H J Gordon, Chris Lauber, Cristiano A Felipe Alves, Brian T Luke, Terry N Hanzlik, Vernon K Ward, Alexander E Gorbalenya.   

Abstract

The Tetraviridae is a family of non-enveloped positive-stranded RNA insect viruses that is defined by the T=4 symmetry of virions. We report the complete Euprosterna elaeasa virus (EeV) genome sequence of 5698 nt with no poly(A) tail and two overlapping open reading frames, encoding the replicase and capsid precursor, with approximately 67% amino acid identity to Thosea asigna virus (TaV). The N-terminally positioned 17 kDa protein is released from the capsid precursor by a NPGP motif. EeV has 40 nm non-enveloped isometric particles composed of 58 and 7 kDa proteins. The 3'-end of TaV/EeV is predicted to form a conserved pseudoknot. Replicases of TaV and EeV include a newly delineated VPg signal mediating the protein priming of RNA synthesis in dsRNA Birnaviridae. Results of rooted phylogenetic analysis of replicase and capsid proteins are presented to implicate recombination between monopartite tetraviruses, involving autonomization of a sgRNA, in the emergence of bipartite tetraviruses. They are also used to revise the Tetraviridae taxonomy. Copyright 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19954807     DOI: 10.1016/j.virol.2009.10.042

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  16 in total

1.  A Deep Insight Into the Sialotranscriptome of the Chagas Disease Vector, Panstrongylus megistus (Hemiptera: Heteroptera).

Authors:  José M C Ribeiro; Alexandra Schwarz; Ivo M B Francischetti
Journal:  J Med Entomol       Date:  2015-03-29       Impact factor: 2.278

2.  Purification, crystallization and preliminary X-ray diffraction analysis of the RNA-dependent RNA polymerase from Thosea asigna virus.

Authors:  Diego Ferrero; Mònica Buxaderas; José F Rodriguez; Núria Verdaguer
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-29

3.  Characterisation of the RNA Virome of Nine Ochlerotatus Species in Finland.

Authors:  Phuoc T Truong Nguyen; C Lorna Culverwell; Maija T Suvanto; Essi M Korhonen; Ruut Uusitalo; Olli Vapalahti; Teemu Smura; Eili Huhtamo
Journal:  Viruses       Date:  2022-07-07       Impact factor: 5.818

4.  Identification and Characterization of Two Novel Noda-like Viruses from Rice Plants Showing the Dwarfing Symptom.

Authors:  Yi Xie; Shuai Fu; Li Xie; Yaqin Wang; Mengji Cao; Xueping Zhou; Jianxiang Wu
Journal:  Viruses       Date:  2022-05-27       Impact factor: 5.818

5.  A Multicomponent Animal Virus Isolated from Mosquitoes.

Authors:  Jason T Ladner; Michael R Wiley; Brett Beitzel; Albert J Auguste; Alan P Dupuis; Michael E Lindquist; Samuel D Sibley; Krishna P Kota; David Fetterer; Gillian Eastwood; David Kimmel; Karla Prieto; Hilda Guzman; Matthew T Aliota; Daniel Reyes; Ernst E Brueggemann; Lena St John; David Hyeroba; Michael Lauck; Thomas C Friedrich; David H O'Connor; Marie C Gestole; Lisa H Cazares; Vsevolod L Popov; Fanny Castro-Llanos; Tadeusz J Kochel; Tara Kenny; Bailey White; Michael D Ward; Jose R Loaiza; Tony L Goldberg; Scott C Weaver; Laura D Kramer; Robert B Tesh; Gustavo Palacios
Journal:  Cell Host Microbe       Date:  2016-08-25       Impact factor: 21.023

6.  Discovery of the first insect nidovirus, a missing evolutionary link in the emergence of the largest RNA virus genomes.

Authors:  Phan Thi Nga; Maria del Carmen Parquet; Chris Lauber; Manmohan Parida; Takeshi Nabeshima; Fuxun Yu; Nguyen Thanh Thuy; Shingo Inoue; Takashi Ito; Kenta Okamoto; Akitoyo Ichinose; Eric J Snijder; Kouichi Morita; Alexander E Gorbalenya
Journal:  PLoS Pathog       Date:  2011-09-08       Impact factor: 6.823

7.  The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases.

Authors:  Diego S Ferrero; Mònica Buxaderas; José F Rodríguez; Núria Verdaguer
Journal:  PLoS Pathog       Date:  2015-12-01       Impact factor: 6.823

8.  Aphis Glycines Virus 2, a Novel Insect Virus with a Unique Genome Structure.

Authors:  Sijun Liu; Diveena Vijayendran; Yuting Chen; Bryony C Bonning
Journal:  Viruses       Date:  2016-11-19       Impact factor: 5.048

9.  Analyses of the radiation of birnaviruses from diverse host phyla and of their evolutionary affinities with other double-stranded RNA and positive strand RNA viruses using robust structure-based multiple sequence alignments and advanced phylogenetic methods.

Authors:  Jean-François Gibrat; Mahendra Mariadassou; Pierre Boudinot; Bernard Delmas
Journal:  BMC Evol Biol       Date:  2013-07-17       Impact factor: 3.260

10.  Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses.

Authors:  Kathleen C Lehmann; Anastasia Gulyaeva; Jessika C Zevenhoven-Dobbe; George M C Janssen; Mark Ruben; Hermen S Overkleeft; Peter A van Veelen; Dmitry V Samborskiy; Alexander A Kravchenko; Andrey M Leontovich; Igor A Sidorov; Eric J Snijder; Clara C Posthuma; Alexander E Gorbalenya
Journal:  Nucleic Acids Res       Date:  2015-08-24       Impact factor: 16.971

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