Literature DB >> 27569558

A Multicomponent Animal Virus Isolated from Mosquitoes.

Jason T Ladner1, Michael R Wiley2, Brett Beitzel2, Albert J Auguste3, Alan P Dupuis4, Michael E Lindquist5, Samuel D Sibley6, Krishna P Kota7, David Fetterer8, Gillian Eastwood4, David Kimmel2, Karla Prieto2, Hilda Guzman3, Matthew T Aliota4, Daniel Reyes2, Ernst E Brueggemann7, Lena St John2, David Hyeroba9, Michael Lauck10, Thomas C Friedrich11, David H O'Connor10, Marie C Gestole2, Lisa H Cazares12, Vsevolod L Popov3, Fanny Castro-Llanos13, Tadeusz J Kochel13, Tara Kenny7, Bailey White2, Michael D Ward7, Jose R Loaiza14, Tony L Goldberg15, Scott C Weaver3, Laura D Kramer16, Robert B Tesh3, Gustavo Palacios17.   

Abstract

RNA viruses exhibit a variety of genome organization strategies, including multicomponent genomes in which each segment is packaged separately. Although multicomponent genomes are common among viruses infecting plants and fungi, their prevalence among those infecting animals remains unclear. We characterize a multicomponent RNA virus isolated from mosquitoes, designated Guaico Culex virus (GCXV). GCXV belongs to a diverse clade of segmented viruses (Jingmenvirus) related to the prototypically unsegmented Flaviviridae. The GCXV genome comprises five segments, each of which appears to be separately packaged. The smallest segment is not required for replication, and its presence is variable in natural infections. We also describe a variant of Jingmen tick virus, another Jingmenvirus, sequenced from a Ugandan red colobus monkey, thus expanding the host range of this segmented and likely multicomponent virus group. Collectively, this study provides evidence for the existence of multicomponent animal viruses and their potential relevance for animal and human health.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27569558      PMCID: PMC5025392          DOI: 10.1016/j.chom.2016.07.011

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN: 1931-3128            Impact factor:   21.023


  35 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Proteogenomic mapping as a complementary method to perform genome annotation.

Authors:  Jacob D Jaffe; Howard C Berg; George M Church
Journal:  Proteomics       Date:  2004-01       Impact factor: 3.984

3.  An allometric relationship between the genome length and virion volume of viruses.

Authors:  Jie Cui; Timothy E Schlub; Edward C Holmes
Journal:  J Virol       Date:  2014-03-26       Impact factor: 5.103

4.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

5.  Ray Meta: scalable de novo metagenome assembly and profiling.

Authors:  Sébastien Boisvert; Frédéric Raymond; Elénie Godzaridis; François Laviolette; Jacques Corbeil
Journal:  Genome Biol       Date:  2012-12-22       Impact factor: 13.583

6.  Four abundant novel transcript genes from Toxocara canis with unrelated coding sequences share untranslated region tracts implicated in the control of gene expression.

Authors:  Deborah M Callister; Alan D Winter; Antony P Page; Rick M Maizels
Journal:  Mol Biochem Parasitol       Date:  2008-07-25       Impact factor: 1.759

7.  Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses.

Authors:  Mang Shi; Xian-Dan Lin; Nikos Vasilakis; Jun-Hua Tian; Ci-Xiu Li; Liang-Jun Chen; Gillian Eastwood; Xiu-Nian Diao; Ming-Hui Chen; Xiao Chen; Xin-Cheng Qin; Steven G Widen; Thomas G Wood; Robert B Tesh; Jianguo Xu; Edward C Holmes; Yong-Zhen Zhang
Journal:  J Virol       Date:  2015-10-21       Impact factor: 5.103

8.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

9.  trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.

Authors:  Salvador Capella-Gutiérrez; José M Silla-Martínez; Toni Gabaldón
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

10.  Viral genome sequencing by random priming methods.

Authors:  Appolinaire Djikeng; Rebecca Halpin; Ryan Kuzmickas; Jay Depasse; Jeremy Feldblyum; Naomi Sengamalay; Claudio Afonso; Xinsheng Zhang; Norman G Anderson; Elodie Ghedin; David J Spiro
Journal:  BMC Genomics       Date:  2008-01-07       Impact factor: 3.969

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  46 in total

1.  High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia.

Authors:  Mang Shi; Peter Neville; Jay Nicholson; John-Sebastian Eden; Allison Imrie; Edward C Holmes
Journal:  J Virol       Date:  2017-08-10       Impact factor: 5.103

Review 2.  Strength in numbers: Mechanisms of viral co-infection.

Authors:  Elizabeth R Aguilera; Julie K Pfeiffer
Journal:  Virus Res       Date:  2019-03-02       Impact factor: 3.303

3.  Viral evolution: Animal viruses in pieces.

Authors:  Naomi Attar
Journal:  Nat Rev Microbiol       Date:  2016-09-06       Impact factor: 60.633

4.  Genome-Wide Patterns of Gene Expression in a Wild Primate Indicate Species-Specific Mechanisms Associated with Tolerance to Natural Simian Immunodeficiency Virus Infection.

Authors:  Noah D Simons; Geeta N Eick; Maria J Ruiz-Lopez; David Hyeroba; Patrick A Omeja; Geoffrey Weny; HaoQiang Zheng; Anupama Shankar; Simon D W Frost; James H Jones; Colin A Chapman; William M Switzer; Tony L Goldberg; Kirstin N Sterner; Nelson Ting
Journal:  Genome Biol Evol       Date:  2019-06-01       Impact factor: 3.416

Review 5.  Promiscuous viruses-how do viruses survive multiple unrelated hosts?

Authors:  Gregory D Ebel
Journal:  Curr Opin Virol       Date:  2017-05-31       Impact factor: 7.090

Review 6.  Diversity and evolution of the animal virome.

Authors:  Erin Harvey; Edward C Holmes
Journal:  Nat Rev Microbiol       Date:  2022-01-04       Impact factor: 60.633

7.  Meta-Transcriptomic Analysis Reveals the Virome and Viral Genomic Evolution of Medically Important Mites.

Authors:  Liping Guo; Xiaoyu Lu; Xue Liu; Ping Li; Junyu Wu; Fan Xing; Hong Peng; Xiaojun Xiao; Mang Shi; Zhigang Liu; Xiao-Dong Li; Deyin Guo
Journal:  J Virol       Date:  2020-11-18       Impact factor: 5.103

Review 8.  Population Diversity and Collective Interactions during Influenza Virus Infection.

Authors:  Christopher B Brooke
Journal:  J Virol       Date:  2017-10-27       Impact factor: 5.103

9.  Partitiviruses Infecting Drosophila melanogaster and Aedes aegypti Exhibit Efficient Biparental Vertical Transmission.

Authors:  Shaun T Cross; Bernadette L Maertens; Tillie J Dunham; Case P Rodgers; Ali L Brehm; Megan R Miller; Alissa M Williams; Brian D Foy; Mark D Stenglein
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

10.  Distribution of Dermacentor silvarum and Associated Pathogens: Meta-Analysis of Global Published Data and a Field Survey in China.

Authors:  Wen-Bin Guo; Wen-Qiang Shi; Qian Wang; Yu-Sheng Pan; Qiao-Cheng Chang; Bao-Gui Jiang; Jing-Xia Cheng; Xiao-Ming Cui; Yu-Hao Zhou; Jia-Te Wei; Yi Sun; Jia-Fu Jiang; Na Jia; Wu-Chun Cao
Journal:  Int J Environ Res Public Health       Date:  2021-04-22       Impact factor: 3.390

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