Literature DB >> 19941831

A sample preparation protocol for 1H nuclear magnetic resonance studies of water-soluble metabolites in blood and urine.

John R Sheedy1, Peter R Ebeling, Paul R Gooley, Malcolm J McConville.   

Abstract

We describe a general protocol for preparing protein-containing biofluids for (1)H nuclear magnetic resonance (NMR) metabolomic studies. In this protocol, untreated samples are diluted in deuterated solvents to precipitate proteins and recover metabolites quantitated relative to standard reference compounds such as 3-trimethylsilylpropionic acid (TSP) and 2,2-dimethyl-2-silapentane-5-sulfonic acid (DSS). The efficacy of this protocol was tested using a bovine serum albumin/metabolite mix and human serum samples. This sample preparation method can be readily applied to any protein-containing biofluid for (1)H NMR studies. Copyright (c) 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19941831     DOI: 10.1016/j.ab.2009.11.027

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  9 in total

1.  Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites.

Authors:  Alison N Thorburn; Craig I McKenzie; Sj Shen; Dragana Stanley; Laurence Macia; Linda J Mason; Laura K Roberts; Connie H Y Wong; Raymond Shim; Remy Robert; Nina Chevalier; Jian K Tan; Eliana Mariño; Rob J Moore; Lee Wong; Malcolm J McConville; Dedreia L Tull; Lisa G Wood; Vanessa E Murphy; Joerg Mattes; Peter G Gibson; Charles R Mackay
Journal:  Nat Commun       Date:  2015-06-23       Impact factor: 14.919

2.  1H nuclear magnetic resonance-based extracellular metabolomic analysis of multidrug resistant Tca8113 oral squamous carcinoma cells.

Authors:  Hui Wang; Jiao Chen; Yun Feng; Wenjie Zhou; Jihua Zhang; Y U Yu; Xiaoqian Wang; Ping Zhang
Journal:  Oncol Lett       Date:  2015-04-21       Impact factor: 2.967

3.  NMR Metabolomics Analysis of Parkinson's Disease.

Authors:  Shulei Lei; Robert Powers
Journal:  Curr Metabolomics       Date:  2013

4.  Progress in Metabolomics Standardisation and its Significance in Future Clinical Laboratory Medicine.

Authors:  Daniel A Dias; Therese Koal
Journal:  EJIFCC       Date:  2016-12-01

5.  Post-Exertional Malaise Is Associated with Hypermetabolism, Hypoacetylation and Purine Metabolism Deregulation in ME/CFS Cases.

Authors:  Neil R McGregor; Christopher W Armstrong; Donald P Lewis; Paul R Gooley
Journal:  Diagnostics (Basel)       Date:  2019-07-04

6.  Bugs and Brains, the Gut and Mental Health Study: a mixed-methods study investigating microbiota composition and function in anxiety, depression and irritable bowel syndrome.

Authors:  Carra A Simpson; Orli S Schwartz; Djamila Eliby; Catherine A Butler; Katherine Huang; Neil O'Brien-Simpson; Bridget L Callaghan; Stuart G Dashper; Paul R Gooley; Sarah Whittle; Nick Haslam; Julian G Simmons
Journal:  BMJ Open       Date:  2021-03-15       Impact factor: 2.692

7.  Physiological oxygen culture reveals retention of metabolic memory in human induced pluripotent stem cells.

Authors:  Alexandra J Harvey; Carmel O'Brien; Jack Lambshead; John R Sheedy; Joy Rathjen; Andrew L Laslett; David K Gardner
Journal:  PLoS One       Date:  2018-03-15       Impact factor: 3.240

8.  Alpha-linolenic acid stabilizes HIF-1 α and downregulates FASN to promote mitochondrial apoptosis for mammary gland chemoprevention.

Authors:  Subhadeep Roy; Atul Kumar Rawat; Shreesh Raj Sammi; Uma Devi; Manjari Singh; Swetlana Gautam; Rajnish Kumar Yadav; Jitendra Kumar Rawat; Lakhveer Singh; Mohd Nazam Ansari; Abdulaziz S Saeedan; Rakesh Pandey; Dinesh Kumar; Gaurav Kaithwas
Journal:  Oncotarget       Date:  2017-07-25

9.  Psychopharmacological effects of riparin III from Aniba riparia (Nees) Mez. (Lauraceae) supported by metabolic approach and multivariate data analysis.

Authors:  Sócrates Golzio Dos Santos; Isis Fernandes Gomes; Adriana Maria Fernandes de Oliveira Golzio; Augusto Lopes Souto; Marcus Tullius Scotti; Josean Fechine Tavares; Stanley Juan Chavez Gutierrez; Reinaldo Nóbrega de Almeida; José Maria Barbosa-Filho; Marcelo Sobral da Silva
Journal:  BMC Complement Med Ther       Date:  2020-05-16
  9 in total

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