Literature DB >> 26078917

NMR Metabolomics Analysis of Parkinson's Disease.

Shulei Lei1, Robert Powers1.   

Abstract

Parkinson's disease (PD) is a neurodegenerative disease, which is characterized by progressive death of dopaminergic neurons in the substantia nigra pars compacta. Although mitochondrial dysfunction and oxidative stress are linked to PD pathogenesis, its etiology and pathology remain to be elucidated. Metabolomics investigates metabolite changes in biofluids, cell lysates, tissues and tumors in order to correlate these metabolomic changes to a disease state. Thus, the application of metabolomics to investigate PD provides a systematic approach to understand the pathology of PD, to identify disease biomarkers, and to complement genomics, transcriptomics and proteomics studies. This review will examine current research into PD mechanisms with a focus on mitochondrial dysfunction and oxidative stress. Neurotoxin-based PD animal models and the rationale for metabolomics studies in PD will also be discussed. The review will also explore the potential of NMR metabolomics to address important issues related to PD treatment and diagnosis.

Entities:  

Keywords:  Biomarkers; Metabolomics; NMR; OPLS; PCA; PLS; Parkinson's disease

Year:  2013        PMID: 26078917      PMCID: PMC4465192          DOI: 10.2174/2213235X113019990004

Source DB:  PubMed          Journal:  Curr Metabolomics        ISSN: 2213-235X


  198 in total

1.  Strategy for choosing extraction procedures for NMR-based metabolomic analysis of mammalian cells.

Authors:  Estelle Martineau; Illa Tea; Gregory Loaëc; Patrick Giraudeau; Serge Akoka
Journal:  Anal Bioanal Chem       Date:  2011-08-13       Impact factor: 4.142

2.  Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets.

Authors:  Olivier Cloarec; Marc-Emmanuel Dumas; Andrew Craig; Richard H Barton; Johan Trygg; Jane Hudson; Christine Blancher; Dominique Gauguier; John C Lindon; Elaine Holmes; Jeremy Nicholson
Journal:  Anal Chem       Date:  2005-03-01       Impact factor: 6.986

3.  Negative impact of noise on the principal component analysis of NMR data.

Authors:  Steven Halouska; Robert Powers
Journal:  J Magn Reson       Date:  2005-09-27       Impact factor: 2.229

4.  Parkinson-like syndrome induced by continuous MPTP infusion: convergent roles of the ubiquitin-proteasome system and alpha-synuclein.

Authors:  Francesco Fornai; Oliver M Schlüter; Paola Lenzi; Marco Gesi; Riccardo Ruffoli; Michela Ferrucci; Gloria Lazzeri; Carla L Busceti; Fabrizio Pontarelli; Giuseppe Battaglia; Antonio Pellegrini; Ferdinando Nicoletti; Stefano Ruggieri; Antonio Paparelli; Thomas C Südhof
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-16       Impact factor: 11.205

5.  Statistical methods for comparing comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry results: metabolomic analysis of mouse tissue extracts.

Authors:  Robert A Shellie; Werner Welthagen; Jitka Zrostliková; Joachim Spranger; Michael Ristow; Oliver Fiehn; Ralf Zimmermann
Journal:  J Chromatogr A       Date:  2005-09-09       Impact factor: 4.759

Review 6.  Using 'omics' to define pathogenesis and biomarkers of Parkinson's disease.

Authors:  W Michael Caudle; Theo K Bammler; Yvonne Lin; Sheng Pan; Jing Zhang
Journal:  Expert Rev Neurother       Date:  2010-06       Impact factor: 4.618

7.  Metabolomics to unveil and understand phenotypic diversity between pathogen populations.

Authors:  Ruben t'Kindt; Richard A Scheltema; Andris Jankevics; Kirstyn Brunker; Suman Rijal; Jean-Claude Dujardin; Rainer Breitling; David G Watson; Graham H Coombs; Saskia Decuypere
Journal:  PLoS Negl Trop Dis       Date:  2010-11-30

Review 8.  Biomarkers for trials of neuroprotection in Parkinson's disease.

Authors:  Pankaj A Agarwal; A Jon Stoessl
Journal:  Mov Disord       Date:  2012-08-24       Impact factor: 10.338

9.  Mutant LRRK2(R1441G) BAC transgenic mice recapitulate cardinal features of Parkinson's disease.

Authors:  Yanping Li; Wencheng Liu; Tinmarla F Oo; Lei Wang; Yi Tang; Vernice Jackson-Lewis; Chun Zhou; Kindiya Geghman; Mikhail Bogdanov; Serge Przedborski; M Flint Beal; Robert E Burke; Chenjian Li
Journal:  Nat Neurosci       Date:  2009-06-07       Impact factor: 24.884

10.  GC/MS analysis of the rat urine for metabonomic research.

Authors:  Qi Zhang; Guangji Wang; Yu Du; Lingling Zhu; A Jiye
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2007-04-08       Impact factor: 3.205

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  14 in total

1.  NMR-Based Metabolomics Reveal a Recovery from Metabolic Changes in the Striatum of 6-OHDA-Induced Rats Treated with Basic Fibroblast Growth Factor.

Authors:  Hong Zheng; Liangcai Zhao; Huanhuan Xia; Cuicui Xu; Dan Wang; Kun Liu; Li Lin; Xiaokun Li; Zhihan Yan; Hongchang Gao
Journal:  Mol Neurobiol       Date:  2015-12-09       Impact factor: 5.590

Review 2.  Biomarker Research in Parkinson's Disease Using Metabolite Profiling.

Authors:  Jesper F Havelund; Niels H H Heegaard; Nils J K Færgeman; Jan Bert Gramsbergen
Journal:  Metabolites       Date:  2017-08-11

3.  Metabolic Disturbances in the Striatum and Substantia Nigra in the Onset and Progression of MPTP-Induced Parkinsonism Model.

Authors:  Yi Lu; Xiaoxia Zhang; Liangcai Zhao; Changwei Yang; Linlin Pan; Chen Li; Kun Liu; Guanghui Bai; Hongchang Gao; Zhihan Yan
Journal:  Front Neurosci       Date:  2018-02-20       Impact factor: 4.677

4.  Neurotoxin-Induced Animal Models of Parkinson Disease: Pathogenic Mechanism and Assessment.

Authors:  Xian-Si Zeng; Wen-Shuo Geng; Jin-Jing Jia
Journal:  ASN Neuro       Date:  2018 Jan-Dec       Impact factor: 4.146

5.  Using an NMR metabolomics approach to investigate the pathogenicity of amyloid-beta and alpha-synuclein.

Authors:  M M Phelan; E Caamaño-Gutiérrez; M S Gant; R X Grosman; J Madine
Journal:  Metabolomics       Date:  2017-10-29       Impact factor: 4.290

6.  Chronic sleep restriction in the rotenone Parkinson's disease model in rats reveals peripheral early-phase biomarkers.

Authors:  Juliane Fagotti; Adriano D S Targa; Lais S Rodrigues; Ana Carolina D Noseda; Flávia W C Dorieux; Franciele F Scarante; Jessica L Ilkiw; Fernando M Louzada; Namrata R Chowdhury; Daan R van der Veen; Benita Middleton; Jeroen L A Pennings; Jonathan R Swann; Debra J Skene; Marcelo M S Lima
Journal:  Sci Rep       Date:  2019-02-13       Impact factor: 4.379

Review 7.  Recent advances and perspectives of metabolomics-based investigations in Parkinson's disease.

Authors:  Yaping Shao; Weidong Le
Journal:  Mol Neurodegener       Date:  2019-01-11       Impact factor: 14.195

Review 8.  The current state of drug discovery and a potential role for NMR metabolomics.

Authors:  Robert Powers
Journal:  J Med Chem       Date:  2014-03-03       Impact factor: 7.446

9.  Altered Striatocerebellar Metabolism and Systemic Inflammation in Parkinson's Disease.

Authors:  Chiun-Chieh Yu; Meng-Hsiang Chen; Cheng-Hsien Lu; Yung-Cheng Huang; Hsiu-Ling Chen; Nai-Wen Tsai; Hung-Chen Wang; I-Hsiao Yang; Shau-Hsuan Li; Wei-Che Lin
Journal:  Oxid Med Cell Longev       Date:  2016-09-01       Impact factor: 6.543

Review 10.  Melatonin and Other Tryptophan Metabolites Produced by Yeasts: Implications in Cardiovascular and Neurodegenerative Diseases.

Authors:  Ruth Hornedo-Ortega; Ana B Cerezo; Ana M Troncoso; M Carmen Garcia-Parrilla; Albert Mas
Journal:  Front Microbiol       Date:  2016-01-19       Impact factor: 5.640

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