Literature DB >> 19934651

Unlocking the Arabidopsis epigenome.

Jon Reinders1, Jerzy Paszkowski.   

Abstract

The patterns of DNA methylation, referred to as the "methylome," must be faithfully propagated for proper development of plants and mammals. However, it has been unclear to which extent transgenerational epigenetic inheritance will be affected after DNA methylation distribution has been altered. Recently, three reports have addressed this issue in the model plant Arabidopsis thaliana. Here we revisit the results of these experiments addressing the stability of epigenetic inheritance within two populations of epigenetic recombinant inbred lines (epiRILs), in which mosaic epigenomes were subjected to inbreeding for multiple generations. The manner in which the epigenetic variation was induced differed between the two populations, one by adversely affecting chromatin remodeling and the second by impairing the maintenance of DNA methylation, yet the comparison of the results provides a broader view of transgenerational epigenetic inheritance that may find parallels in other organisms.

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Year:  2009        PMID: 19934651     DOI: 10.4161/epi.4.8.10347

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  12 in total

1.  Loss of DNA methylation affects the recombination landscape in Arabidopsis.

Authors:  Marie Mirouze; Michal Lieberman-Lazarovich; Riccardo Aversano; Etienne Bucher; Joël Nicolet; Jon Reinders; Jerzy Paszkowski
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

Review 2.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

3.  Understanding the evolutionary potential of epigenetic variation: a comparison of heritable phenotypic variation in epiRILs, RILs, and natural ecotypes of Arabidopsis thaliana.

Authors:  Yuan-Ye Zhang; Vit Latzel; Markus Fischer; Oliver Bossdorf
Journal:  Heredity (Edinb)       Date:  2018-06-06       Impact factor: 3.821

Review 4.  Epigenetic perspectives on the evolution and domestication of polyploid plant and crops.

Authors:  Mingquan Ding; Z Jeffrey Chen
Journal:  Curr Opin Plant Biol       Date:  2018-03-07       Impact factor: 7.834

Review 5.  Harnessing epigenetic variability for crop improvement: current status and future prospects.

Authors:  Eun Yu Kim; Kyung Do Kim; Jungnam Cho
Journal:  Genes Genomics       Date:  2021-11-22       Impact factor: 1.839

6.  Atypical epigenetic mark in an atypical location: cytosine methylation at asymmetric (CNN) sites within the body of a non-repetitive tomato gene.

Authors:  Rodrigo M González; Martiniano M Ricardi; Norberto D Iusem
Journal:  BMC Plant Biol       Date:  2011-05-20       Impact factor: 4.215

7.  Epigenetic marks in an adaptive water stress-responsive gene in tomato roots under normal and drought conditions.

Authors:  Rodrigo M González; Martiniano M Ricardi; Norberto D Iusem
Journal:  Epigenetics       Date:  2013-06-27       Impact factor: 4.528

8.  Environmentally selected aphid variants in clonality context display differential patterns of methylation in the genome.

Authors:  Claude Pasquier; Mathilde Clément; Aviv Dombrovsky; Stéphanie Penaud; Martine Da Rocha; Corinne Rancurel; Neil Ledger; Maria Capovilla; Alain Robichon
Journal:  PLoS One       Date:  2014-12-31       Impact factor: 3.240

9.  A Multigenic Network of ARGONAUTE4 Clade Members Controls Early Megaspore Formation in Arabidopsis.

Authors:  Elvira Hernández-Lagana; Daniel Rodríguez-Leal; Judith Lúa; Jean-Philippe Vielle-Calzada
Journal:  Genetics       Date:  2016-09-02       Impact factor: 4.562

10.  Genome-wide quantitative identification of DNA differentially methylated sites in Arabidopsis seedlings growing at different water potential.

Authors:  Alejandro C Colaneri; Alan M Jones
Journal:  PLoS One       Date:  2013-04-08       Impact factor: 3.240

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