Literature DB >> 19933307

Application of OMICS technologies in occupational and environmental health research; current status and projections.

J Vlaanderen1, L E Moore, M T Smith, Q Lan, L Zhang, C F Skibola, N Rothman, R Vermeulen.   

Abstract

OMICS technologies are relatively new biomarker discovery tools that can be applied to study large sets of biological molecules. Their application in human observational studies (HOS) has become feasible in recent years due to a spectacular increase in the sensitivity, resolution and throughput of OMICS-based assays. Although, the number of OMICS techniques is ever expanding, the five most developed OMICS technologies are genotyping, transcriptomics, epigenomics, proteomics and metabolomics. These techniques have been applied in HOS to various extents. However, their application in occupational environmental health (OEH) research has been limited. Here, we will discuss the opportunities these new techniques provide for OEH research. In addition we will address difficulties and limitations to the interpretation of the data that is generated by OMICS technologies. To illustrate the current status of the application of OMICS in OEH research, we will provide examples of studies that used OMICS technologies to investigate human health effects of two well-known toxicants, benzene and arsenic.

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Year:  2009        PMID: 19933307      PMCID: PMC2910417          DOI: 10.1136/oem.2008.042788

Source DB:  PubMed          Journal:  Occup Environ Med        ISSN: 1351-0711            Impact factor:   4.402


  94 in total

Review 1.  Accessing genetic variation: genotyping single nucleotide polymorphisms.

Authors:  A C Syvänen
Journal:  Nat Rev Genet       Date:  2001-12       Impact factor: 53.242

Review 2.  Use of 'Omic' technologies to study humans exposed to benzene.

Authors:  Martyn T Smith; Roel Vermeulen; Guilan Li; Luoping Zhang; Qing Lan; Alan E Hubbard; Matthew S Forrest; Cliona McHale; Xin Zhao; Laura Gunn; Min Shen; Stephen M Rappaport; Songnian Yin; Stephen Chanock; Nathaniel Rothman
Journal:  Chem Biol Interact       Date:  2005-04-19       Impact factor: 5.192

Review 3.  Antibody microarrays: current status and key technological advances.

Authors:  Christer Wingren; Carl A K Borrebaeck
Journal:  OMICS       Date:  2006

Review 4.  Phenotypic plasticity and the epigenetics of human disease.

Authors:  Andrew P Feinberg
Journal:  Nature       Date:  2007-05-24       Impact factor: 49.962

Review 5.  Metabolomics: available results, current research projects in breast cancer, and future applications.

Authors:  Wederson Marcos Claudino; Alessandro Quattrone; Laura Biganzoli; Marta Pestrin; Ivano Bertini; Angelo Di Leo
Journal:  J Clin Oncol       Date:  2007-05-14       Impact factor: 44.544

6.  DNA hypermethylation of promoter of gene p53 and p16 in arsenic-exposed people with and without malignancy.

Authors:  Sarmishtha Chanda; Uma B Dasgupta; Debendranath Guhamazumder; Mausumi Gupta; Utpal Chaudhuri; Sarbari Lahiri; Subhankar Das; Nilima Ghosh; Debdutta Chatterjee
Journal:  Toxicol Sci       Date:  2005-10-26       Impact factor: 4.849

Review 7.  Glutathione S-transferase M1 (GSTM1) polymorphisms and lung cancer: a literature-based systematic HuGE review and meta-analysis.

Authors:  C Carlsten; G S Sagoo; A J Frodsham; W Burke; J P T Higgins
Journal:  Am J Epidemiol       Date:  2008-02-12       Impact factor: 4.897

8.  Large-scale evaluation of candidate genes identifies associations between DNA repair and genomic maintenance and development of benzene hematotoxicity.

Authors:  Qing Lan; Luoping Zhang; Min Shen; William J Jo; Roel Vermeulen; Guilan Li; Christopher Vulpe; Sophia Lim; Xuefeng Ren; Stephen M Rappaport; Sonja I Berndt; Meredith Yeager; Jeff Yuenger; Richard B Hayes; Martha Linet; Songnian Yin; Stephen Chanock; Martyn T Smith; Nathaniel Rothman
Journal:  Carcinogenesis       Date:  2008-10-31       Impact factor: 4.944

9.  Activation of inflammation/NF-kappaB signaling in infants born to arsenic-exposed mothers.

Authors:  Rebecca C Fry; Panida Navasumrit; Chandni Valiathan; J Peter Svensson; Bradley J Hogan; Manlin Luo; Sanchita Bhattacharya; Krittinee Kandjanapa; Sumitra Soontararuks; Sumontha Nookabkaew; Chulabhorn Mahidol; Mathuros Ruchirawat; Leona D Samson
Journal:  PLoS Genet       Date:  2007-11       Impact factor: 5.917

Review 10.  Interfering with disease: a progress report on siRNA-based therapeutics.

Authors:  Antonin de Fougerolles; Hans-Peter Vornlocher; John Maraganore; Judy Lieberman
Journal:  Nat Rev Drug Discov       Date:  2007-06       Impact factor: 84.694

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  24 in total

1.  Arsenic exposure and toxicology: a historical perspective.

Authors:  Michael F Hughes; Barbara D Beck; Yu Chen; Ari S Lewis; David J Thomas
Journal:  Toxicol Sci       Date:  2011-07-12       Impact factor: 4.849

2.  Problem formulation and phenotypic characterisation for the development of novel crops.

Authors:  Alan Raybould
Journal:  Transgenic Res       Date:  2019-08       Impact factor: 2.788

3.  Precision medicine and molecular imaging: new targeted approaches toward cancer therapeutic and diagnosis.

Authors:  Mojtaba Ghasemi; Iraj Nabipour; Abdolmajid Omrani; Zeinab Alipour; Majid Assadi
Journal:  Am J Nucl Med Mol Imaging       Date:  2016-11-30

4.  Transcriptome profile analysis reveals specific signatures of pollutants in Atlantic eels.

Authors:  Lucie Baillon; Fabien Pierron; Raphaël Coudret; Eric Normendeau; Antoine Caron; Laurent Peluhet; Pierre Labadie; Hélène Budzinski; Gilles Durrieu; Jérôme Sarraco; Pierre Elie; Patrice Couture; Magalie Baudrimont; Louis Bernatchez
Journal:  Ecotoxicology       Date:  2014-09-26       Impact factor: 2.823

5.  DNA methylation modifies urine biomarker levels in 1,6-hexamethylene diisocyanate exposed workers: a pilot study.

Authors:  Leena A Nylander-French; Michael C Wu; John E French; Jayne C Boyer; Lisa Smeester; Alison P Sanders; Rebecca C Fry
Journal:  Toxicol Lett       Date:  2014-10-22       Impact factor: 4.372

Review 6.  Minireview: Epigenetics of obesity and diabetes in humans.

Authors:  Howard Slomko; Hye J Heo; Francine H Einstein
Journal:  Endocrinology       Date:  2012-01-17       Impact factor: 4.736

7.  A Systematic Framework for Collecting Site-Specific Sampling and Survey Data to Support Analyses of Health Impacts from Land-Based Pollution in Low- and Middle-Income Countries.

Authors:  Katherine von Stackelberg; Pamela R D Williams; Ernesto Sánchez-Triana
Journal:  Int J Environ Res Public Health       Date:  2021-04-28       Impact factor: 3.390

Review 8.  Functional toxicogenomics: mechanism-centered toxicology.

Authors:  Matthew North; Chris D Vulpe
Journal:  Int J Mol Sci       Date:  2010-11-24       Impact factor: 5.923

9.  Future research perspectives on environment and health: the requirement for a more expansive concept of translational cancer research.

Authors:  Christopher P Wild
Journal:  Environ Health       Date:  2011-04-05       Impact factor: 5.984

10.  Metabolomics tools for describing complex pesticide exposure in pregnant women in Brittany (France).

Authors:  Nathalie Bonvallot; Marie Tremblay-Franco; Cécile Chevrier; Cécile Canlet; Charline Warembourg; Jean-Pierre Cravedi; Sylvaine Cordier
Journal:  PLoS One       Date:  2013-05-21       Impact factor: 3.240

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