Literature DB >> 11733746

Accessing genetic variation: genotyping single nucleotide polymorphisms.

A C Syvänen1.   

Abstract

Understanding the relationship between genetic variation and biological function on a genomic scale is expected to provide fundamental new insights into the biology, evolution and pathophysiology of humans and other species. The hope that single nucleotide polymorphisms (SNPs) will allow genes that underlie complex disease to be identified, together with progress in identifying large sets of SNPs, are the driving forces behind intense efforts to establish the technology for large-scale analysis of SNPs. New genotyping methods that are high throughput, accurate and cheap are urgently needed for gaining full access to the abundant genetic variation of organisms.

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Year:  2001        PMID: 11733746     DOI: 10.1038/35103535

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  195 in total

1.  Genotyping on a thermal gradient DNA chip.

Authors:  Tomoharu Kajiyama; Yuji Miyahara; Larry J Kricka; Peter Wilding; David J Graves; Saul Surrey; Paolo Fortina
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

2.  Detection of single-nucleotide polymorphisms in Plasmodium falciparum by PCR primer extension and lateral flow immunoassay.

Authors:  A P H A Moers; R L Hallett; R Burrow; H D F H Schallig; C J Sutherland; A van Amerongen
Journal:  Antimicrob Agents Chemother       Date:  2014-11-03       Impact factor: 5.191

3.  A novel method for SNP detection using a new duplex-specific nuclease from crab hepatopancreas.

Authors:  Dmitry A Shagin; Denis V Rebrikov; Valery B Kozhemyako; Ilia M Altshuler; Alex S Shcheglov; Pavel A Zhulidov; Ekaterina A Bogdanova; Dmitry B Staroverov; Valery A Rasskazov; Sergey Lukyanov
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

4.  Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA.

Authors:  Lovisa Lovmar; Mona Fredriksson; Ulrika Liljedahl; Snaevar Sigurdsson; Ann-Christine Syvänen
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

5.  Comparison of GenFlex Tag array and Pyrosequencing in SNP genotyping.

Authors:  Daniel C Chen; Janna Saarela; Ilpo Nuotio; Anne Jokiaho; Leena Peltonen; Aarno Palotie
Journal:  J Mol Diagn       Date:  2003-11       Impact factor: 5.568

6.  Typing single-nucleotide polymorphisms using a gel-based sequencer: a new data analysis tool and suggestions for improved efficiency.

Authors:  Bart J Jungerius; A Veenendaal; Bernard A Van Oost; Marinus F W Te Pas; Martien A M Groenen
Journal:  Mol Biotechnol       Date:  2003-11       Impact factor: 2.695

7.  An approach for global scanning of single nucleotide variations.

Authors:  Xinghua Pan; Sherman M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

8.  Genotyping single nucleotide polymorphisms directly from genomic DNA by invasive cleavage reaction on microspheres.

Authors:  Kakuturu V N Rao; Priscilla Wilkins Stevens; Jeff G Hall; Victor Lyamichev; Bruce P Neri; David M Kelso
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

9.  Single-nucleotide polymorphism genotyping on optical thin-film biosensor chips.

Authors:  Xiao-Bo Zhong; Robert Reynolds; Judith R Kidd; Kenneth K Kidd; Robert Jenison; Richard A Marlar; David C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-15       Impact factor: 11.205

Review 10.  Directed polymerase evolution.

Authors:  Tingjian Chen; Floyd E Romesberg
Journal:  FEBS Lett       Date:  2013-11-05       Impact factor: 4.124

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