Literature DB >> 19931430

15N-NMR characterization of His residues in and around the active site of FeSOD.

Anne-Frances Miller1, Emine Yikilmaz, Surekha Vathyam.   

Abstract

We have exploited (15)N-NMR to observe histidine (His) side chains in and around the active site of Fe-containing superoxide dismutase (FeSOD). In the oxidized state, we observe all the non-ligand His side chains and in the reduced state we can account for all the signals in the imidazole spectral region in terms of the non-ligand His', paramagnetically displaced signals from two backbone amides, and the side chain of glutamine 69 (Gln69). We also observe signals from the His' that ligate Fe(II). These confirm that neither the Q69H nor the Q69E mutation strongly affects the Fe(II) electronic structure, despite the 250 mV and >660 mV increases in E(m) they produce, respectively. In the Q69H mutant, we observe two new signals attributable to the His introduced into the active site in place of Gln69. One corresponds to a protonated N and the other is strongly paramagnetically shifted, to 500 ppm. The strong paramagnetic effects support the existence of an H-bond between His69 and the solvent molecule coordinated to Fe(II), as proposed based on crystallography. Based on previous information that His69 is neutral, we infer that the shifted N is not protonated. Therefore, we propose that this N represents a site of H-bond acceptance from coordinated solvent, representing a reversal of the polarity of this H-bond from that in WT (wild-type) FeSOD protein. We also present evidence that substrate analogs bind to Fe(II)SOD outside the Fe(II) coordination sphere, affecting Gln69 but without direct involvement of His30. Copyright 2009 Elsevier B.V. All rights reserved.

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Year:  2009        PMID: 19931430      PMCID: PMC6011655          DOI: 10.1016/j.bbapap.2009.11.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  39 in total

1.  Mutagenesis of a proton linkage pathway in Escherichia coli manganese superoxide dismutase.

Authors:  M M Whittaker; J W Whittaker
Journal:  Biochemistry       Date:  1997-07-22       Impact factor: 3.162

2.  Structure-function relationships in iron and manganese superoxide dismutases.

Authors:  W C Stallings; A L Metzger; K A Pattridge; J A Fee; M L Ludwig
Journal:  Free Radic Res Commun       Date:  1991

3.  Physical and chemical studies on bacterial superoxide dismutases. Purification and some anion binding properties of the iron-containing protein of Escherichia coli B.

Authors:  T O Slykhouse; J A Fee
Journal:  J Biol Chem       Date:  1976-09-25       Impact factor: 5.157

4.  Spectroscopic measurement of a long-predicted active site pK in iron-superoxide dismutase from Escherichia coli.

Authors:  D L Sorkin; A F Miller
Journal:  Biochemistry       Date:  1997-04-22       Impact factor: 3.162

5.  Removing a hydrogen bond in the dimer interface of Escherichia coli manganese superoxide dismutase alters structure and reactivity.

Authors:  R A Edwards; M M Whittaker; J W Whittaker; E N Baker; G B Jameson
Journal:  Biochemistry       Date:  2001-04-17       Impact factor: 3.162

Review 6.  The 2-His-1-carboxylate facial triad: a versatile platform for dioxygen activation by mononuclear non-heme iron(II) enzymes.

Authors:  Kevin D Koehntop; Joseph P Emerson; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2005-03-01       Impact factor: 3.358

7.  Probing the active site of human manganese superoxide dismutase: the role of glutamine 143.

Authors:  Y Hsieh; Y Guan; C Tu; P J Bratt; A Angerhofer; J R Lepock; M J Hickey; J A Tainer; H S Nick; D N Silverman
Journal:  Biochemistry       Date:  1998-04-07       Impact factor: 3.162

8.  Spectroscopic and computational studies on iron and manganese superoxide dismutases: nature of the chemical events associated with active-site pKs.

Authors:  Timothy A Jackson; Juan Xie; Emine Yikilmaz; Anne-Frances Miller; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2002-09-11       Impact factor: 15.419

9.  Specificity and phenetic relationships of iron- and manganese-containing superoxide dismutases on the basis of structure and sequence comparisons.

Authors:  René Wintjens; Christophe Noël; Alex C W May; Delphine Gerbod; Fabienne Dufernez; Monique Capron; Eric Viscogliosi; Marianne Rooman
Journal:  J Biol Chem       Date:  2003-12-12       Impact factor: 5.157

10.  15N NMR spectroscopy of hydrogen-bonding interactions in the active site of serine proteases: evidence for a moving histidine mechanism.

Authors:  W W Bachovchin
Journal:  Biochemistry       Date:  1986-11-18       Impact factor: 3.162

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  4 in total

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Journal:  FEBS Lett       Date:  2011-11-10       Impact factor: 4.124

Review 2.  Superoxide dismutases and superoxide reductases.

Authors:  Yuewei Sheng; Isabel A Abreu; Diane E Cabelli; Michael J Maroney; Anne-Frances Miller; Miguel Teixeira; Joan Selverstone Valentine
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

3.  Combined QM/MM and Monte Carlo study for redox leveling in Mn and Fe superoxide dismutase.

Authors:  Muhamed Amin; Zainab Mohamed; Mohamed El-Sayed; Asmaa Samy; Afnan Sultan; Mahmoud Bassuoni; Mohamed H Alkordi
Journal:  J Biol Inorg Chem       Date:  2017-12-27       Impact factor: 3.358

4.  Engineering a dirhodium artificial metalloenzyme for selective olefin cyclopropanation.

Authors:  Poonam Srivastava; Hao Yang; Ken Ellis-Guardiola; Jared C Lewis
Journal:  Nat Commun       Date:  2015-07-24       Impact factor: 14.919

  4 in total

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