Literature DB >> 19924426

Automated software for analysis of ciliary beat frequency and metachronal wave orientation in primary ciliary dyskinesia.

Giulia Mantovani1, Massimo Pifferi, Giovanni Vozzi.   

Abstract

Patients with primary ciliary dyskinesia (PCD) have structural and/or functional alterations of cilia that imply deficits in mucociliary clearance and different respiratory pathologies. A useful indicator for the difficult diagnosis is the ciliary beat frequency (CBF) that is significantly lower in pathological cases than in physiological ones. The CBF computation is not rapid, therefore, the aim of this study is to propose an automated method to evaluate it directly from videos of ciliated cells. The cells are taken from inferior nasal turbinates and videos of ciliary movements are registered and eventually processed by the developed software. The software consists in the extraction of features from videos (written with C++ language) and the computation of the frequency (written with Matlab language). This system was tested both on the samples of nasal cavity and software models, and the results were really promising because in a few seconds, it can compute a reliable frequency if compared with that measured with visual methods. It is to be noticed that the reliability of the computation increases with the quality of acquisition system and especially with the sampling frequency. It is concluded that the developed software could be a useful mean for PCD diagnosis.

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Year:  2009        PMID: 19924426     DOI: 10.1007/s00405-009-1161-y

Source DB:  PubMed          Journal:  Eur Arch Otorhinolaryngol        ISSN: 0937-4477            Impact factor:   2.503


  15 in total

1.  Correlation between ciliary beat frequency and metachronal wave disorder using image analysis method.

Authors:  W J Yi; K S Park; C H Lee; C S Rhee
Journal:  Med Biol Eng Comput       Date:  2003-07       Impact factor: 2.602

2.  Regional analysis of sinonasal ciliary beat frequency.

Authors:  Jeffrey Shaari; James N Palmer; Alexander G Chiu; Kevin D Judy; Akiva S Cohen; David W Kennedy; Noam A Cohen
Journal:  Am J Rhinol       Date:  2006 Mar-Apr

Review 3.  Mucociliary clearance--a critical upper airway host defense mechanism and methods of assessment.

Authors:  Marcelo B Antunes; Noam A Cohen
Journal:  Curr Opin Allergy Clin Immunol       Date:  2007-02

4.  Measurement of in vitro ciliary beat frequency: a television-video modification of the transmitted light technique.

Authors:  H Teichtahl; P L Wright; R L Kirsner
Journal:  Med Biol Eng Comput       Date:  1986-03       Impact factor: 2.602

5.  Primary ciliary dyskinesia: diagnosis in children with inconclusive ultrastructural evaluation.

Authors:  M Pifferi; A M Cangiotti; V Ragazzo; G Baldini; S Cinti; A L Boner
Journal:  Pediatr Allergy Immunol       Date:  2001-10       Impact factor: 6.377

6.  Ciliary beat frequency in human bronchi and bronchioles.

Authors:  C Clary-Meinesz; J Mouroux; P Huitorel; J Cosson; D Schoevaert; B Blaive
Journal:  Chest       Date:  1997-03       Impact factor: 9.410

7.  Primary ciliary dyskinesia: age at diagnosis and symptom history.

Authors:  M E Coren; M Meeks; I Morrison; R M Buchdahl; A Bush
Journal:  Acta Paediatr       Date:  2002       Impact factor: 2.299

Review 8.  Primary ciliary dyskinesia (the immotile cilia syndrome).

Authors:  D V Schidlow
Journal:  Ann Allergy       Date:  1994-12

Review 9.  Primary ciliary dyskinesia: diagnosis and standards of care.

Authors:  A Bush; P Cole; M Hariri; I Mackay; G Phillips; C O'Callaghan; R Wilson; J O Warner
Journal:  Eur Respir J       Date:  1998-10       Impact factor: 16.671

Review 10.  Primary ciliary dyskinesia: current state of the art.

Authors:  Andrew Bush; Rahul Chodhari; Nicola Collins; Fiona Copeland; Pippa Hall; Jonny Harcourt; Mohamed Hariri; Claire Hogg; Jane Lucas; Hannah M Mitchison; Christopher O'Callaghan; Gill Phillips
Journal:  Arch Dis Child       Date:  2007-07-18       Impact factor: 3.791

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  7 in total

Review 1.  Seeing cilia: imaging modalities for ciliary motion and clinical connections.

Authors:  Jacelyn E Peabody; Ren-Jay Shei; Brent M Bermingham; Scott E Phillips; Brett Turner; Steven M Rowe; George M Solomon
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2018-03-01       Impact factor: 5.464

2.  Assessing the Collective Dynamics of Motile Cilia in Cultures of Human Airway Cells by Multiscale DDM.

Authors:  Luigi Feriani; Maya Juenet; Cedar J Fowler; Nicolas Bruot; Maurizio Chioccioli; Steven M Holland; Clare E Bryant; Pietro Cicuta
Journal:  Biophys J       Date:  2017-07-11       Impact factor: 4.033

3.  Automated identification of abnormal respiratory ciliary motion in nasal biopsies.

Authors:  Shannon P Quinn; Maliha J Zahid; John R Durkin; Richard J Francis; Cecilia W Lo; S Chakra Chennubhotla
Journal:  Sci Transl Med       Date:  2015-08-05       Impact factor: 17.956

4.  Phenotyping ciliary dynamics and coordination in response to CFTR-modulators in Cystic Fibrosis respiratory epithelial cells.

Authors:  M Chioccioli; L Feriani; J Kotar; P E Bratcher; P Cicuta
Journal:  Nat Commun       Date:  2019-04-16       Impact factor: 14.919

5.  Microscopy-Based Automated Live Cell Screening for Small Molecules That Affect Ciliation.

Authors:  Peishan Zhang; Anna A Kiseleva; Vladislav Korobeynikov; Hanqing Liu; Margret B Einarson; Erica A Golemis
Journal:  Front Genet       Date:  2019-02-12       Impact factor: 4.599

Review 6.  Leveraging 3D Model Systems to Understand Viral Interactions with the Respiratory Mucosa.

Authors:  Ethan Iverson; Logan Kaler; Eva L Agostino; Daniel Song; Gregg A Duncan; Margaret A Scull
Journal:  Viruses       Date:  2020-12-11       Impact factor: 5.048

7.  ciliaFA: a research tool for automated, high-throughput measurement of ciliary beat frequency using freely available software.

Authors:  Claire M Smith; Jana Djakow; Robert C Free; Petr Djakow; Rana Lonnen; Gwyneth Williams; Petr Pohunek; Robert A Hirst; Andrew J Easton; Peter W Andrew; Christopher O'Callaghan
Journal:  Cilia       Date:  2012-08-01
  7 in total

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