Literature DB >> 19923226

A Bre1-associated protein, large 1 (Lge1), promotes H2B ubiquitylation during the early stages of transcription elongation.

Young-Ha Song1, Seong Hoon Ahn.   

Abstract

Transcription activation has been proposed to require both ubiquitylation and deubiquitylation of histone H2B. Here, we show that Lge1 (Large 1) is found in a complex containing Rad6.Bre1 and that it controls the recruitment of Bre1, a ubiquitin ligase, and Ubp8, a deubiquitylase, to promote ubiquitylation during the early steps in elongation. Chromatin immunoprecipitation experiments showed that Lge1 associates with promoter and coding regions of actively transcribed genes in a transcription-dependent manner. Disruption of Lge1 abolished ubiquitylation of histone H2B on lysine 123 and H3 methylation on lysines 4 and 79 and resulted in significant sensitivity to 6-azauracil and mycophenolic acid. In particular, in Lge1-deficient cells, Bre1 recruitment was attenuated, whereas recruitment of Ubp8 was facilitated. These alterations were coincident with changes in the interaction between Bre1.Ubp8 and RNA polymerase II phosphorylated at serine 5 of the C-terminal domain. We propose that Lge1 has a novel function in disrupting the balance between the recruitment of Bre1 and Ubp8, thus promoting transcription elongation.

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Year:  2009        PMID: 19923226      PMCID: PMC2807294          DOI: 10.1074/jbc.M109.039255

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

1.  Redundant roles for the TFIID and SAGA complexes in global transcription.

Authors:  T I Lee; H C Causton; F C Holstege; W C Shen; N Hannett; E G Jennings; F Winston; M R Green; R A Young
Journal:  Nature       Date:  2000-06-08       Impact factor: 49.962

2.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

3.  Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain.

Authors:  E J Cho; M S Kobor; M Kim; J Greenblatt; S Buratowski
Journal:  Genes Dev       Date:  2001-12-15       Impact factor: 11.361

4.  Histone H3 lysine 4 mono-methylation does not require ubiquitination of histone H2B.

Authors:  Pierre-Marie Dehé; Mercè Pamblanco; Pierre Luciano; Régine Lebrun; Danièle Moinier; Ramon Sendra; Alain Verreault; Vicente Tordera; Vincent Géli
Journal:  J Mol Biol       Date:  2005-09-09       Impact factor: 5.469

Review 5.  Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

6.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

7.  Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.

Authors:  Yuen Ho; Albrecht Gruhler; Adrian Heilbut; Gary D Bader; Lynda Moore; Sally-Lin Adams; Anna Millar; Paul Taylor; Keiryn Bennett; Kelly Boutilier; Lingyun Yang; Cheryl Wolting; Ian Donaldson; Søren Schandorff; Juanita Shewnarane; Mai Vo; Joanne Taggart; Marilyn Goudreault; Brenda Muskat; Cris Alfarano; Danielle Dewar; Zhen Lin; Katerina Michalickova; Andrew R Willems; Holly Sassi; Peter A Nielsen; Karina J Rasmussen; Jens R Andersen; Lene E Johansen; Lykke H Hansen; Hans Jespersen; Alexandre Podtelejnikov; Eva Nielsen; Janne Crawford; Vibeke Poulsen; Birgitte D Sørensen; Jesper Matthiesen; Ronald C Hendrickson; Frank Gleeson; Tony Pawson; Michael F Moran; Daniel Durocher; Matthias Mann; Christopher W V Hogue; Daniel Figeys; Mike Tyers
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

8.  Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5.

Authors:  S Barbaric; J Walker; A Schmid; J Q Svejstrup; W Hörz
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

9.  Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo.

Authors:  Abhijit Shukla; Nadia Stanojevic; Zhen Duan; Payel Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

10.  A DNA integrity network in the yeast Saccharomyces cerevisiae.

Authors:  Xuewen Pan; Ping Ye; Daniel S Yuan; Xiaoling Wang; Joel S Bader; Jef D Boeke
Journal:  Cell       Date:  2006-02-16       Impact factor: 41.582

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  21 in total

1.  Genome-wide function of H2B ubiquitylation in promoter and genic regions.

Authors:  Kiran Batta; Zhenhai Zhang; Kuangyu Yen; David B Goffman; B Franklin Pugh
Journal:  Genes Dev       Date:  2011-11-01       Impact factor: 11.361

Review 2.  H2B ubiquitination: Conserved molecular mechanism, diverse physiologic functions of the E3 ligase during meiosis.

Authors:  Liying Wang; Chunwei Cao; Fang Wang; Jianguo Zhao; Wei Li
Journal:  Nucleus       Date:  2017-06-19       Impact factor: 4.197

Review 3.  The Epigenetic Pathways to Ribosomal DNA Silencing.

Authors:  Rakesh Srivastava; Rashmi Srivastava; Seong Hoon Ahn
Journal:  Microbiol Mol Biol Rev       Date:  2016-06-01       Impact factor: 11.056

4.  Splitting the task: Ubp8 and Ubp10 deubiquitinate different cellular pools of H2BK123.

Authors:  Julia M Schulze; Thomas Hentrich; Shima Nakanishi; Arvind Gupta; Eldon Emberly; Ali Shilatifard; Michael S Kobor
Journal:  Genes Dev       Date:  2011-11-01       Impact factor: 11.361

5.  Functional analysis of Bre1p, an E3 ligase for histone H2B ubiquitylation, in regulation of RNA polymerase II association with active genes and transcription in vivo.

Authors:  Rwik Sen; Shweta Lahudkar; Geetha Durairaj; Sukesh R Bhaumik
Journal:  J Biol Chem       Date:  2013-02-15       Impact factor: 5.157

6.  A chemical-genetic screen to unravel the genetic network of CDC28/CDK1 links ubiquitin and Rad6-Bre1 to cell cycle progression.

Authors:  Christine Zimmermann; Pierre Chymkowitch; Vegard Eldholm; Christopher D Putnam; Jessica M Lindvall; Manja Omerzu; Magnar Bjørås; Richard D Kolodner; Jorrit M Enserink
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-31       Impact factor: 11.205

7.  WAC, a functional partner of RNF20/40, regulates histone H2B ubiquitination and gene transcription.

Authors:  Feng Zhang; Xiaochun Yu
Journal:  Mol Cell       Date:  2011-02-18       Impact factor: 17.970

8.  The histone H4 basic patch regulates SAGA-mediated H2B deubiquitination and histone acetylation.

Authors:  Hashem A Meriesh; Andrew M Lerner; Mahesh B Chandrasekharan; Brian D Strahl
Journal:  J Biol Chem       Date:  2020-04-03       Impact factor: 5.157

9.  The Budding Yeast Ubiquitin Protease Ubp7 Is a Novel Component Involved in S Phase Progression.

Authors:  Stefanie Böhm; Barnabas Szakal; Benjamin W Herken; Meghan R Sullivan; Michael J Mihalevic; Faiz F Kabbinavar; Dana Branzei; Nathan L Clark; Kara A Bernstein
Journal:  J Biol Chem       Date:  2016-01-06       Impact factor: 5.157

10.  A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export.

Authors:  Paula Oliete-Calvo; Joan Serrano-Quílez; Carme Nuño-Cabanes; María E Pérez-Martínez; Luis M Soares; Bernhard Dichtl; Stephen Buratowski; José E Pérez-Ortín; Susana Rodríguez-Navarro
Journal:  EMBO Rep       Date:  2018-09-24       Impact factor: 8.807

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