Literature DB >> 19917217

High-chloride concentrations abolish the binding of adenine nucleotides in the mitochondrial ADP/ATP carrier family.

Eva-Maria Krammer1, Stéphanie Ravaud, François Dehez, Annie Frelet-Barrand, Eva Pebay-Peyroula, Christophe Chipot.   

Abstract

The ADP/ATP carrier (AAC) is a very effective membrane protein that mediates the exchange of ADP and ATP across the mitochondrial membrane. In vivo transport measurements on the AAC overexpressed in Escherichia coli demonstrate that this process can be severely inhibited by high-chloride concentrations. Molecular-dynamics simulations reveal a strong modification of the topology of the local electric field related to the number of chloride ions inside the cavity. Halide ions are shown to shield the positive charges lining the internal cavity of the carrier by accurate targeting of key basic residues. These specific amino acids are highly conserved as highlighted by the analysis of multiple AAC sequences. These results strongly suggest that the chloride concentration acts as an electrostatic lock for the mitochondrial AAC family, thereby preventing adenine nucleotides from reaching their dedicated binding sites.

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Year:  2009        PMID: 19917217      PMCID: PMC2776247          DOI: 10.1016/j.bpj.2009.08.047

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  15 in total

1.  Kinetics of electrogenic transport by the ADP/ATP carrier.

Authors:  T Gropp; N Brustovetsky; M Klingenberg; V Müller; K Fendler; E Bamberg
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

2.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

3.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

Review 4.  Molecular, functional, and pathological aspects of the mitochondrial ADP/ATP carrier.

Authors:  C Dahout-Gonzalez; H Nury; V Trézéguet; G J-M Lauquin; E Pebay-Peyroula; G Brandolin
Journal:  Physiology (Bethesda)       Date:  2006-08

Review 5.  Relations between structure and function of the mitochondrial ADP/ATP carrier.

Authors:  H Nury; C Dahout-Gonzalez; V Trézéguet; G J M Lauquin; G Brandolin; E Pebay-Peyroula
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

6.  The reconstituted ADP/ATP carrier from mitochondria is both inhibited and activated by anions.

Authors:  R Krämer; G Kürzinger
Journal:  Biochim Biophys Acta       Date:  1984-06-26

7.  Influence of divalent cations on the reconstituted ADP, ATP exchange.

Authors:  R Krämer
Journal:  Biochim Biophys Acta       Date:  1980-10-03

8.  Electrical currents associated with nucleotide transport by the reconstituted mitochondrial ADP/ATP carrier.

Authors:  N Brustovetsky; A Becker; M Klingenberg; E Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-23       Impact factor: 11.205

9.  United-atom acyl chains for CHARMM phospholipids.

Authors:  Jérôme Hénin; Wataru Shinoda; Michael L Klein
Journal:  J Phys Chem B       Date:  2008-05-16       Impact factor: 2.991

10.  Electrostatic funneling of substrate in mitochondrial inner membrane carriers.

Authors:  Yi Wang; Emad Tajkhorshid
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-08       Impact factor: 11.205

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  8 in total

1.  Mapping multiple potential ATP binding sites on the matrix side of the bovine ADP/ATP carrier by the combined use of MD simulation and docking.

Authors:  Daniele Di Marino; Francesco Oteri; Blasco Morozzo della Rocca; Ilda D'Annessa; Mattia Falconi
Journal:  J Mol Model       Date:  2011-10-12       Impact factor: 1.810

2.  Structure, substrate binding, and symmetry of the mitochondrial ADP/ATP carrier in its matrix-open state.

Authors:  Joel José Montalvo-Acosta; Edmund R S Kunji; Jonathan J Ruprecht; François Dehez; Christophe Chipot
Journal:  Biophys J       Date:  2021-11-06       Impact factor: 4.033

3.  Molecular mechanism of thiamine pyrophosphate import into mitochondria: a molecular simulation study.

Authors:  F Van Liefferinge; E-M Krammer; J Waeytens; M Prévost
Journal:  J Comput Aided Mol Des       Date:  2021-08-18       Impact factor: 3.686

Review 4.  Perturbations of Native Membrane Protein Structure in Alkyl Phosphocholine Detergents: A Critical Assessment of NMR and Biophysical Studies.

Authors:  Christophe Chipot; François Dehez; Jason R Schnell; Nicole Zitzmann; Eva Pebay-Peyroula; Laurent J Catoire; Bruno Miroux; Edmund R S Kunji; Gianluigi Veglia; Timothy A Cross; Paul Schanda
Journal:  Chem Rev       Date:  2018-02-28       Impact factor: 60.622

5.  Heterologous expression of membrane proteins: choosing the appropriate host.

Authors:  Florent Bernaudat; Annie Frelet-Barrand; Nathalie Pochon; Sébastien Dementin; Patrick Hivin; Sylvain Boutigny; Jean-Baptiste Rioux; Daniel Salvi; Daphné Seigneurin-Berny; Pierre Richaud; Jacques Joyard; David Pignol; Monique Sabaty; Thierry Desnos; Eva Pebay-Peyroula; Elisabeth Darrouzet; Thierry Vernet; Norbert Rolland
Journal:  PLoS One       Date:  2011-12-21       Impact factor: 3.240

Review 6.  The molecular features of uncoupling protein 1 support a conventional mitochondrial carrier-like mechanism.

Authors:  Paul G Crichton; Yang Lee; Edmund R S Kunji
Journal:  Biochimie       Date:  2017-01-03       Impact factor: 4.079

7.  The effect of respiration buffer composition on mitochondrial metabolism and function.

Authors:  Lucas C Wollenman; Matthew R Vander Ploeg; Mackinzie L Miller; Yizhu Zhang; Jason N Bazil
Journal:  PLoS One       Date:  2017-11-01       Impact factor: 3.240

8.  ANT1 Activation and Inhibition Patterns Support the Fatty Acid Cycling Mechanism for Proton Transport.

Authors:  Jürgen Kreiter; Anne Rupprecht; Sanja Škulj; Zlatko Brkljača; Kristina Žuna; Denis G Knyazev; Sarah Bardakji; Mario Vazdar; Elena E Pohl
Journal:  Int J Mol Sci       Date:  2021-03-02       Impact factor: 5.923

  8 in total

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