Literature DB >> 19914241

Beyond ribosome rescue: tmRNA and co-translational processes.

Christopher S Hayes1, Kenneth C Keiler.   

Abstract

tmRNA is a unique bi-functional RNA that acts as both a tRNA and an mRNA to enter stalled ribosomes and direct the addition of a peptide tag to the C terminus of nascent polypeptides. Despite a reasonably clear understanding of tmRNA activity, the reason for its absolute conservation throughout the eubacteria is unknown. Although tmRNA plays many physiological roles in different bacterial systems, recent studies suggest a general role for trans-translation in monitoring protein folding and perhaps other co-translational processes. This review will focus on these new hypotheses and the data that support them.

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Year:  2010        PMID: 19914241      PMCID: PMC2794900          DOI: 10.1016/j.febslet.2009.11.023

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  66 in total

1.  Aminoacylated tmRNA from Escherichia coli interacts with prokaryotic elongation factor Tu.

Authors:  J Rudinger-Thirion; R Giegé; B Felden
Journal:  RNA       Date:  1999-08       Impact factor: 4.942

2.  SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity.

Authors:  E D Roche; R T Sauer
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

3.  Cleavage of the A site mRNA codon during ribosome pausing provides a mechanism for translational quality control.

Authors:  Christopher S Hayes; Robert T Sauer
Journal:  Mol Cell       Date:  2003-10       Impact factor: 17.970

4.  Ribosome rescue: tmRNA tagging activity and capacity in Escherichia coli.

Authors:  Sean D Moore; Robert T Sauer
Journal:  Mol Microbiol       Date:  2005-10       Impact factor: 3.501

5.  tmRNA-induced release of messenger RNA from stalled ribosomes.

Authors:  Natalia Ivanova; Michael Y Pavlov; Måns Ehrenberg
Journal:  J Mol Biol       Date:  2005-07-29       Impact factor: 5.469

6.  Analysis of the Escherichia coli Alp phenotype: heat shock induction in ssrA mutants.

Authors:  Hussain Munavar; Yanning Zhou; Susan Gottesman
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

7.  Characterization of ChpBK, an mRNA interferase from Escherichia coli.

Authors:  Yonglong Zhang; Ling Zhu; Junjie Zhang; Masayori Inouye
Journal:  J Biol Chem       Date:  2005-05-18       Impact factor: 5.157

8.  Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA.

Authors:  Susanne K Christensen; Kim Pedersen; Flemming G Hansen; Kenn Gerdes
Journal:  J Mol Biol       Date:  2003-09-26       Impact factor: 5.469

9.  Features of ribosome-peptidyl-tRNA interactions essential for tryptophan induction of tna operon expression.

Authors:  Luis Rogelio Cruz-Vera; Soumitra Rajagopal; Catherine Squires; Charles Yanofsky
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

10.  Mapping the interaction of SmpB with ribosomes by footprinting of ribosomal RNA.

Authors:  Natalia Ivanova; Michael Y Pavlov; Elli Bouakaz; Måns Ehrenberg; Lovisa Holmberg Schiavone
Journal:  Nucleic Acids Res       Date:  2005-06-21       Impact factor: 16.971

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  32 in total

1.  Active and accurate trans-translation requires distinct determinants in the C-terminal tail of SmpB protein and the mRNA-like domain of transfer messenger RNA (tmRNA).

Authors:  Devin Camenares; Daniel P Dulebohn; Anton Svetlanov; A Wali Karzai
Journal:  J Biol Chem       Date:  2013-08-28       Impact factor: 5.157

Review 2.  Bacterial transcriptomics: what is beyond the RNA horiz-ome?

Authors:  Marc Güell; Eva Yus; Maria Lluch-Senar; Luis Serrano
Journal:  Nat Rev Microbiol       Date:  2011-08-12       Impact factor: 60.633

Review 3.  Mechanisms of ribosome rescue in bacteria.

Authors:  Kenneth C Keiler
Journal:  Nat Rev Microbiol       Date:  2015-04-13       Impact factor: 60.633

Review 4.  Surveillance pathways rescuing eukaryotic ribosomes lost in translation.

Authors:  Marc Graille; Bertrand Séraphin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-10-17       Impact factor: 94.444

Review 5.  Resolving nonstop translation complexes is a matter of life or death.

Authors:  Kenneth C Keiler; Heather A Feaga
Journal:  J Bacteriol       Date:  2014-04-04       Impact factor: 3.490

Review 6.  The tmRNA ribosome-rescue system.

Authors:  Brian D Janssen; Christopher S Hayes
Journal:  Adv Protein Chem Struct Biol       Date:  2012       Impact factor: 3.507

7.  Deletion of the RluD pseudouridine synthase promotes SsrA peptide tagging of ribosomal protein S7.

Authors:  Ryan E Schaub; Christopher S Hayes
Journal:  Mol Microbiol       Date:  2010-11-29       Impact factor: 3.501

8.  tmRNA regulates synthesis of the ArfA ribosome rescue factor.

Authors:  Fernando Garza-Sánchez; Ryan E Schaub; Brian D Janssen; Christopher S Hayes
Journal:  Mol Microbiol       Date:  2011-03-30       Impact factor: 3.501

9.  Involvement of Enterococcus faecalis small RNAs in stress response and virulence.

Authors:  Charlotte Michaux; Axel Hartke; Cecilia Martini; Swantje Reiss; Dirk Albrecht; Aurélie Budin-Verneuil; Maurizio Sanguinetti; Susanne Engelmann; Torsten Hain; Nicolas Verneuil; Jean-Christophe Giard
Journal:  Infect Immun       Date:  2014-06-09       Impact factor: 3.441

10.  Proteobacterial ArfA peptides are synthesized from non-stop messenger RNAs.

Authors:  Ryan E Schaub; Stephen J Poole; Fernando Garza-Sánchez; Sarah Benbow; Christopher S Hayes
Journal:  J Biol Chem       Date:  2012-07-12       Impact factor: 5.157

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