Literature DB >> 19911767

Mono-amine functionalized phthalocyanines: microwave-assisted solid-phase synthesis and bioconjugation strategies.

S Sibel Erdem1, Irina V Nesterova, Steven A Soper, Robert P Hammer.   

Abstract

Phthalocyanines (Pcs) are excellent candidates for use as fluors for near-infrared (near-IR) fluorescent tagging of biomolecules for a wide variety of bioanalytical applications. Monofunctionalized Pcs, having two different types of peripheral substitutents, one for covalent conjugation of the Pc to biomolecules and others to improve the solubility of the macrocycle, are ideally suited for the desired applications. To date, difficulties faced during the purification of monofunctionalized Pcs limited their usage in various types of applications. Herein are reported a new synthetic method for rapid synthesis of the target Pcs and bioconjugation techniques for labeling of the oligonucleotides with the near-IR fluors. A novel synthetic route was developed utilizing a hydrophilic, poly(ethylene glycol) (PEG)-based support with an acid-labile Rink Amide linker. The Pcs were functionalized with an amine group for covalent conjugation purposes and were decorated with short PEG chains, serving as solubilizing groups. Microwave-assisted solid-phase synthetic method was successfully applied to obtain pure asymmetrically substituted monoamine functionalized Pcs in a short period of time. Three different bioconjugation techniques, reductive amination, amidation, and Huisgen cycloaddition, were employed for covalent conjugation of Pcs to oligonucleotides. The described microwave-assisted bioconjugation methods give an opportunity to synthesize and isolate the Pc-oligonucleotide conjugate in a few hours.

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Year:  2009        PMID: 19911767      PMCID: PMC2796328          DOI: 10.1021/jo901424v

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  10 in total

1.  Collection of trace amounts of DNA/mRNA molecules using genomagnetic nanocapturers.

Authors:  Xiaojun Zhao; Rovelyn Tapec-Dytioco; Kemin Wang; Weihong Tan
Journal:  Anal Chem       Date:  2003-07-15       Impact factor: 6.986

2.  A stepwise huisgen cycloaddition process: copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes.

Authors:  Vsevolod V Rostovtsev; Luke G Green; Valery V Fokin; K Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2002-07-15       Impact factor: 15.336

3.  RAFT and click chemistry: a versatile approach to well-defined block copolymers.

Authors:  Damien Quémener; Thomas P Davis; Christopher Barner-Kowollik; Martina H Stenzel
Journal:  Chem Commun (Camb)       Date:  2006-10-12       Impact factor: 6.222

4.  Fluorescence-based detection of short DNA sequences under non-denaturing conditions.

Authors:  Irina V Smolina; Heiko Kuhn; Charles Lee; Maxim D Frank-Kamenetskii
Journal:  Bioorg Med Chem       Date:  2007-05-05       Impact factor: 3.641

5.  Solid-phase synthesis of asymmetrically substituted "AB3-type" phthalocyanines.

Authors:  S Sibel Erdem; Irina V Nesterova; Steven A Soper; Robert P Hammer
Journal:  J Org Chem       Date:  2008-05-30       Impact factor: 4.354

6.  Microwave assisted "click" chemistry for the synthesis of multiple labeled-carbohydrate oligonucleotides on solid support.

Authors:  Camille Bouillon; Albert Meyer; Sébastien Vidal; Anne Jochum; Yann Chevolot; Jean-Pierre Cloarec; Jean-Pierre Praly; Jean-Jacques Vasseur; François Morvan
Journal:  J Org Chem       Date:  2006-06-09       Impact factor: 4.354

7.  Water soluble metallo-phthalocyanines: the role of the functional groups on the spectral and photophysical properties.

Authors:  Vera T Verdree; Serhii Pakhomov; Guifa Su; Michael W Allen; Amber C Countryman; Robert P Hammer; Steven A Soper
Journal:  J Fluoresc       Date:  2007-06-16       Impact factor: 2.217

8.  Metallo-phthalocyanine near-IR fluorophores: oligonucleotide conjugates and their applications in PCR assays.

Authors:  Irina V Nesterova; Vera T Verdree; Serhii Pakhomov; Karen L Strickler; Michael W Allen; Robert P Hammer; Steven A Soper
Journal:  Bioconjug Chem       Date:  2007-11-21       Impact factor: 4.774

9.  Phthalocyanine dimerization-based molecular beacons using near-IR fluorescence.

Authors:  Irina V Nesterova; S Sibel Erdem; Serhii Pakhomov; Robert P Hammer; Steven A Soper
Journal:  J Am Chem Soc       Date:  2009-02-25       Impact factor: 15.419

Review 10.  Near-Infrared Fluorescent Materials for Sensing of Biological Targets.

Authors:  Carrie L Amiot; Shuping Xu; Song Liang; Lingyun Pan; Julia Xiaojun Zhao
Journal:  Sensors (Basel)       Date:  2008-05-08       Impact factor: 3.576

  10 in total
  4 in total

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Authors:  Emma M Pelegri-O'Day; Samantha J Paluck; Heather D Maynard
Journal:  J Am Chem Soc       Date:  2017-01-12       Impact factor: 15.419

2.  Aggregation and thermoresponsive properties of new star block copolymers with a cholic acid core.

Authors:  Cancan Li; Christine Lavigueur; X X Zhu
Journal:  Langmuir       Date:  2011-08-12       Impact factor: 3.882

3.  Rapid grafting of azido-labeled oligo(ethylene glycol)s onto an alkynyl-terminated monolayer on nonoxidized silicon via microwave-assisted "click" reaction.

Authors:  Yan Li; Jun Wang; Chengzhi Cai
Journal:  Langmuir       Date:  2011-02-09       Impact factor: 3.882

4.  Synthesizing and evaluating the photodynamic efficacy of asymmetric heteroleptic A7B type novel lanthanide bis-phthalocyanine complexes.

Authors:  Emel Önal; Özge Tüncel; Mohamad Albakour; Gizem Gümüşgöz Çelik; Ayşe Gül Gürek; Serdar Özçelik
Journal:  RSC Adv       Date:  2021-02-03       Impact factor: 3.361

  4 in total

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