Literature DB >> 19908874

Exploring potency and selectivity receptor antagonist profiles using a multilabel classification approach: the human adenosine receptors as a key study.

Lisa Michielan1, Federico Stephanie, Lothar Terfloth, Dimitar Hristozov, Barbara Cacciari, Karl-Norbert Klotz, Giampiero Spalluto, Johann Gasteiger, Stefano Moro.   

Abstract

Nowadays, in medicinal chemistry adenosine receptors represent some of the most studied targets, and there is growing interest on the different adenosine receptor (AR) subtypes. The AR subtypes selectivity is highly desired in the development of potent ligands to achieve the therapeutic success. So far, very few ligand-based strategies have been investigated to predict the receptor subtypes selectivity. In the present study, we have carried out a novel application of the multilabel classification approach by combining our recently reported autocorrelated molecular descriptors encoding for the molecular electrostatic potential (autoMEP) with support vector machines (SVMs). Three valuable models, based on decreasing thresholds of potency, have been generated as in series quantitative sieves for the simultaneous prediction of the hA(1)R, hA(2A)R, hA(2B)R, and hA(3)R subtypes potency profile and selectivity of a large collection, more than 500, of known inverse agonists such as xanthine, pyrazolo-triazolo-pyrimidine, and triazolo-pyrimidine analogues. The robustness and reliability of our multilabel classification models were assessed by predicting an internal test set. Finally, we have applied our strategy to 13 newly synthesized pyrazolo-triazolo-pyrimidine derivatives inferring their full adenosine receptor potency spectrum and hAR subtypes selectivity profile.

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Year:  2009        PMID: 19908874     DOI: 10.1021/ci900311j

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  4 in total

1.  Ligand-, structure- and pharmacophore-based molecular fingerprints: a case study on adenosine A(1), A (2A), A (2B), and A (3) receptor antagonists.

Authors:  Francesco Sirci; Laura Goracci; David Rodríguez; Jacqueline van Muijlwijk-Koezen; Hugo Gutiérrez-de-Terán; Raimund Mannhold
Journal:  J Comput Aided Mol Des       Date:  2012-10-12       Impact factor: 3.686

2.  Predicting Subtype Selectivity for Adenosine Receptor Ligands with Three-Dimensional Biologically Relevant Spectrum (BRS-3D).

Authors:  Song-Bing He; Zheng-Kun Kuang; Dong Wang; De-Xin Kong
Journal:  Sci Rep       Date:  2016-11-04       Impact factor: 4.379

3.  Chemoinformatics Profiling of the Chromone Nucleus as a MAO-B/A2AAR Dual Binding Scaffold.

Authors:  Maykel Cruz-Monteagudo; Fernanda Borges; M Natalia D S Cordeiro; Aliuska Morales Helguera; Eduardo Tejera; Cesar Paz-Y-Mino; Aminael Sanchez-Rodriguez; Yunier Perera-Sardina; Yunierkis Perez-Castillo
Journal:  Curr Neuropharmacol       Date:  2017-11-14       Impact factor: 7.363

4.  Enhancing reaction-based de novo design using a multi-label reaction class recommender.

Authors:  Gian Marco Ghiandoni; Michael J Bodkin; Beining Chen; Dimitar Hristozov; James E A Wallace; James Webster; Valerie J Gillet
Journal:  J Comput Aided Mol Des       Date:  2020-02-28       Impact factor: 3.686

  4 in total

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