Literature DB >> 19898527

A spectrum of gene regulatory phenomena at mammalian beta-globin gene loci.

George Fromm1, Michael Bulger.   

Abstract

The beta-globin gene cluster in mammals, consisting of a set of erythroid-specific, developmentally activated, and (or) silenced genes, has long presented a model system for the investigation of gene regulation. As the number and complexity of models of gene activation and repression have expanded, so too has the complexity of phenomena associated with the regulation of the beta-globin genes. Models for expression from within the locus must account for local (promoter-proximal), distal (enhancer-mediated), and domain-wide components of the regulatory pathways that proceed through mammalian development and erythroid differentiation. In this review, we provide an overview of transcriptional activation, silencing, chromatin structure, and the function of distal regulatory elements involved in the normal developmental regulation of beta-globin gene expression.

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Year:  2009        PMID: 19898527     DOI: 10.1139/O09-048

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  11 in total

1.  Identification of genetic elements that autonomously determine DNA methylation states.

Authors:  Florian Lienert; Christiane Wirbelauer; Indrani Som; Ann Dean; Fabio Mohn; Dirk Schübeler
Journal:  Nat Genet       Date:  2011-10-02       Impact factor: 38.330

2.  Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters.

Authors:  Frederic Koch; Romain Fenouil; Marta Gut; Pierre Cauchy; Thomas K Albert; Joaquin Zacarias-Cabeza; Salvatore Spicuglia; Albane Lamy de la Chapelle; Martin Heidemann; Corinna Hintermair; Dirk Eick; Ivo Gut; Pierre Ferrier; Jean-Christophe Andrau
Journal:  Nat Struct Mol Biol       Date:  2011-07-17       Impact factor: 15.369

3.  Identification of biologically relevant enhancers in human erythroid cells.

Authors:  Mack Y Su; Laurie A Steiner; Hannah Bogardus; Tejaswini Mishra; Vincent P Schulz; Ross C Hardison; Patrick G Gallagher
Journal:  J Biol Chem       Date:  2013-01-22       Impact factor: 5.157

4.  Transcription factors KLF1 and KLF2 positively regulate embryonic and fetal beta-globin genes through direct promoter binding.

Authors:  Yousef N Alhashem; Divya S Vinjamur; Mohua Basu; Ursula Klingmüller; Karin M L Gaensler; Joyce A Lloyd
Journal:  J Biol Chem       Date:  2011-05-24       Impact factor: 5.157

5.  Global transcriptome analysis and enhancer landscape of human primary T follicular helper and T effector lymphocytes.

Authors:  Jason S Weinstein; Kimberly Lezon-Geyda; Yelena Maksimova; Samuel Craft; Yaoping Zhang; Mack Su; Vincent P Schulz; Joseph Craft; Patrick G Gallagher
Journal:  Blood       Date:  2014-10-20       Impact factor: 22.113

6.  An embryonic stage-specific enhancer within the murine β-globin locus mediates domain-wide histone hyperacetylation.

Authors:  George Fromm; Brenda Cadiz-Rivera; Christina de Vries; Michael Getman; Kathleen E McGrath; Paul D Kingsley; Jennifer Fields; Steven Fiering; Michael Bulger
Journal:  Blood       Date:  2011-02-14       Impact factor: 22.113

7.  Genomic organization and evolution of the Atlantic salmon hemoglobin repertoire.

Authors:  Nicole L Quinn; Keith A Boroevich; Krzysztof P Lubieniecki; William Chow; Evelyn A Davidson; Ruth B Phillips; Ben F Koop; William S Davidson
Journal:  BMC Genomics       Date:  2010-10-05       Impact factor: 3.969

8.  Regulatory modules function in a non-autonomous manner to control transcription of the mbp gene.

Authors:  Samar Dib; Eric Denarier; Nancy Dionne; Melissa Beaudoin; Hana H Friedman; Alan C Peterson
Journal:  Nucleic Acids Res       Date:  2010-12-03       Impact factor: 16.971

9.  A combined approach for β-thalassemia based on gene therapy-mediated adult hemoglobin (HbA) production and fetal hemoglobin (HbF) induction.

Authors:  Cristina Zuccato; Laura Breda; Francesca Salvatori; Giulia Breveglieri; Sara Gardenghi; Nicoletta Bianchi; Eleonora Brognara; Ilaria Lampronti; Monica Borgatti; Stefano Rivella; Roberto Gambari
Journal:  Ann Hematol       Date:  2012-03-31       Impact factor: 3.673

10.  Comparative genomics of canine hemoglobin genes reveals primacy of beta subunit delta in adult carnivores.

Authors:  Sara Zaldívar-López; Jennie L Rowell; Elise M Fiala; Isain Zapata; C Guillermo Couto; Carlos E Alvarez
Journal:  BMC Genomics       Date:  2017-02-08       Impact factor: 3.969

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