Literature DB >> 19892202

Techniques to isolate O2-sensitive proteins: [4Fe-4S]-FNR as an example.

Aixin Yan1, Patricia J Kiley.   

Abstract

Many key enzymes in biological redox reactions require metal centers or cofactors for optimum activity and function. While the metal centers provide unique properties for protein structure and function, some also render protein activity sensitive to environmental O(2) and cause experimental challenges to isolation and biochemical analysis. Iron-sulfur (Fe-S) clusters represent an important class of such metal centers and Fe-S proteins are widely distributed in nature. Here, we utilize FNR, a regulatory Fe-S protein from Escherichia coli, as an example to describe the techniques essential to purifying O(2)-labile proteins and summarize various approaches for their biochemical analysis. These methods can be readily adapted to purify other O(2)-labile proteins and advance our understanding of this interesting class of proteins.

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Year:  2009        PMID: 19892202     DOI: 10.1016/S0076-6879(09)63042-1

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  9 in total

1.  The RicAFT (YmcA-YlbF-YaaT) complex carries two [4Fe-4S]2+ clusters and may respond to redox changes.

Authors:  Andrew W Tanner; Valerie J Carabetta; Ryan J Martinie; Ameya A Mashruwala; Jeffrey M Boyd; Carsten Krebs; David Dubnau
Journal:  Mol Microbiol       Date:  2017-04-06       Impact factor: 3.501

2.  UvrC Coordinates an O2-Sensitive [4Fe4S] Cofactor.

Authors:  Rebekah M B Silva; Michael A Grodick; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2020-06-12       Impact factor: 15.419

Review 3.  Bacterial adaptation of respiration from oxic to microoxic and anoxic conditions: redox control.

Authors:  Emilio Bueno; Socorro Mesa; Eulogio J Bedmar; David J Richardson; Maria J Delgado
Journal:  Antioxid Redox Signal       Date:  2012-01-25       Impact factor: 8.401

4.  Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.

Authors:  Matthew D Youngblut; Chi-Lin Tsai; Iain C Clark; Hans K Carlson; Adrian P Maglaqui; Phonchien S Gau-Pan; Steven A Redford; Alan Wong; John A Tainer; John D Coates
Journal:  J Biol Chem       Date:  2016-03-03       Impact factor: 5.157

5.  Characterization of the [2Fe-2S] cluster of Escherichia coli transcription factor IscR.

Authors:  Angela S Fleischhacker; Audria Stubna; Kuang-Lung Hsueh; Yisong Guo; Sarah J Teter; Justin C Rose; Thomas C Brunold; John L Markley; Eckard Münck; Patricia J Kiley
Journal:  Biochemistry       Date:  2012-05-24       Impact factor: 3.162

6.  Robust Production, Crystallization, Structure Determination, and Analysis of [Fe-S] Proteins: Uncovering Control of Electron Shuttling and Gating in the Respiratory Metabolism of Molybdopterin Guanine Dinucleotide Enzymes.

Authors:  Chi-Lin Tsai; John A Tainer
Journal:  Methods Enzymol       Date:  2017-12-19       Impact factor: 1.600

7.  Ni-NTA Affinity Chromatography to Characterize Protein-Protein Interactions During Fe-S Cluster Biogenesis.

Authors:  Terrell D Carter; F Wayne Outten
Journal:  Methods Mol Biol       Date:  2021

8.  Biochemical properties of Paracoccus denitrificans FnrP: reactions with molecular oxygen and nitric oxide.

Authors:  Jason C Crack; Matthew I Hutchings; Andrew J Thomson; Nick E Le Brun
Journal:  J Biol Inorg Chem       Date:  2016-01-20       Impact factor: 3.358

9.  Identification and Unusual Properties of the Master Regulator FNR in the Extreme Acidophile Acidithiobacillus ferrooxidans.

Authors:  Héctor Osorio; Erin Mettert; Patricia Kiley; Mark Dopson; Eugenia Jedlicki; David S Holmes
Journal:  Front Microbiol       Date:  2019-07-19       Impact factor: 5.640

  9 in total

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