Literature DB >> 19885640

QTL analysis of leaf architecture.

José Manuel Pérez-Pérez1, David Esteve-Bruna, José Luis Micol.   

Abstract

Leaf size and shape define the photosynthetic capability of a plant and have a significant impact on important agronomic traits, such as yield, quality, disease resistance and stress responses. Cultivated varieties of many plant species show remarkable variations in leaf morphology. Such variation usually exhibits a continuous phenotypic distribution and is controlled by the interaction of multiple genes known as quantitative trait loci (QTL). Here, we review several studies that evaluate natural variations in the leaf morphologies of crop species, as well as in the model plant Arabidopsis thaliana. The use of high-throughput, genome-wide approaches such as transcriptomics and metabolomics is helping to identify the nucleotide polymorphism(s) responsible for the phenotypic differences attributed to some of these QTL.

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Year:  2009        PMID: 19885640     DOI: 10.1007/s10265-009-0267-z

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  70 in total

Review 1.  Finding the molecular basis of quantitative traits: successes and pitfalls.

Authors:  J Flint; R Mott
Journal:  Nat Rev Genet       Date:  2001-06       Impact factor: 53.242

2.  A mutational analysis of leaf morphogenesis in Arabidopsis thaliana.

Authors:  G Berná; P Robles; J L Micol
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

Review 3.  Sequencing the genespaces of Medicago truncatula and Lotus japonicus.

Authors:  Nevin D Young; Steven B Cannon; Shusei Sato; Dongjin Kim; Douglas R Cook; Chris D Town; Bruce A Roe; Satoshi Tabata
Journal:  Plant Physiol       Date:  2005-04       Impact factor: 8.340

Review 4.  Natural genetic variation in Arabidopsis: tools, traits and prospects for evolutionary ecology.

Authors:  Chikako Shindo; Giorgina Bernasconi; Christian S Hardtke
Journal:  Ann Bot       Date:  2007-01-26       Impact factor: 4.357

5.  Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing aegilops species.

Authors:  J Dvorák; M C Luo; Z L Yang
Journal:  Genetics       Date:  1998-01       Impact factor: 4.562

6.  QTL analysis of morphological traits in eggplant and implications for conservation of gene function during evolution of solanaceous species.

Authors:  A Frary; S Doganlar; M C Daunay; S D Tanksley
Journal:  Theor Appl Genet       Date:  2003-04-03       Impact factor: 5.699

7.  Genetic and physiological architecture of early vigor in Aegilops tauschii, the D-genome donor of hexaploid wheat. A quantitative trait loci analysis.

Authors:  Margreet W ter Steege; Franka M den Ouden; Hans Lambers; Piet Stam; Anton J M Peeters
Journal:  Plant Physiol       Date:  2005-09-23       Impact factor: 8.340

8.  A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2.

Authors:  S El-Din El-Assal; C Alonso-Blanco; A J Peeters; V Raz; M Koornneef
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

9.  A sequence-tagged linkage map of Brassica rapa.

Authors:  Jung Sun Kim; Tae Young Chung; Graham J King; Mina Jin; Tae-Jin Yang; Yong-Moon Jin; Ho-Il Kim; Beom-Seok Park
Journal:  Genetics       Date:  2006-09       Impact factor: 4.562

10.  Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light.

Authors:  Daniele L Filiault; Carolyn A Wessinger; Jose R Dinneny; Jason Lutes; Justin O Borevitz; Detlef Weigel; Joanne Chory; Julin N Maloof
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-14       Impact factor: 11.205

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  11 in total

1.  Combined Large-Scale Phenotyping and Transcriptomics in Maize Reveals a Robust Growth Regulatory Network.

Authors:  Joke Baute; Dorota Herman; Frederik Coppens; Jolien De Block; Bram Slabbinck; Matteo Dell'Acqua; Mario Enrico Pè; Steven Maere; Hilde Nelissen; Dirk Inzé
Journal:  Plant Physiol       Date:  2016-01-11       Impact factor: 8.340

2.  Genetic architecture of body weight, condition factor and age of sexual maturation in Icelandic Arctic charr (Salvelinus alpinus).

Authors:  Eva Küttner; Hooman K Moghadam; Skúli Skúlason; Roy G Danzmann; Moira M Ferguson
Journal:  Mol Genet Genomics       Date:  2011-05-28       Impact factor: 3.291

3.  Transcriptomic analysis of contrasting inbred lines and F2 segregant of Chinese cabbage provides valuable information on leaf morphology.

Authors:  Sang-Moo Lee; Hayoung Song; Hankuil Yi; Yoonkang Hur
Journal:  Genes Genomics       Date:  2019-03-21       Impact factor: 1.839

4.  A SNP-based GWAS and functional haplotype-based GWAS of flag leaf-related traits and their influence on the yield of bread wheat (Triticum aestivum L.).

Authors:  Shulin Chen; Fang Liu; Wenxue Wu; Yong Jiang; Kehui Zhan
Journal:  Theor Appl Genet       Date:  2021-08-26       Impact factor: 5.699

5.  Leaf development and evolution.

Authors:  Hirokazu Tsukaya
Journal:  J Plant Res       Date:  2009-11-28       Impact factor: 2.629

6.  Genome-wide linkage mapping of yield-related traits in three Chinese bread wheat populations using high-density SNP markers.

Authors:  Faji Li; Weie Wen; Zhonghu He; Jindong Liu; Hui Jin; Shuanghe Cao; Hongwei Geng; Jun Yan; Pingzhi Zhang; Yingxiu Wan; Xianchun Xia
Journal:  Theor Appl Genet       Date:  2018-06-01       Impact factor: 5.699

7.  Genome-wide association study of rice (Oryza sativa L.) leaf traits with a high-throughput leaf scorer.

Authors:  Wanneng Yang; Zilong Guo; Chenglong Huang; Ke Wang; Ni Jiang; Hui Feng; Guoxing Chen; Qian Liu; Lizhong Xiong
Journal:  J Exp Bot       Date:  2015-03-20       Impact factor: 6.992

8.  A high-throughput stereo-imaging system for quantifying rape leaf traits during the seedling stage.

Authors:  Xiong Xiong; Lejun Yu; Wanneng Yang; Meng Liu; Ni Jiang; Di Wu; Guoxing Chen; Lizhong Xiong; Kede Liu; Qian Liu
Journal:  Plant Methods       Date:  2017-01-31       Impact factor: 4.993

9.  Identification of QTL underlying the leaf length and area of different leaves in barley.

Authors:  Binbin Du; Lipan Liu; Qifei Wang; Genlou Sun; Xifeng Ren; Chengdao Li; Dongfa Sun
Journal:  Sci Rep       Date:  2019-03-14       Impact factor: 4.379

10.  Genome-wide association mapping of leaf mass traits in a Vietnamese rice landrace panel.

Authors:  Giang Thi Hoang; Pascal Gantet; Kien Huu Nguyen; Nhung Thi Phuong Phung; Loan Thi Ha; Tuan Thanh Nguyen; Michel Lebrun; Brigitte Courtois; Xuan Hoi Pham
Journal:  PLoS One       Date:  2019-07-08       Impact factor: 3.240

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