Literature DB >> 19884889

Generating specificity and diversity in the transcriptional response to hypoxia.

Urban Lendahl1, Kian Leong Lee, Henry Yang, Lorenz Poellinger.   

Abstract

The sensing of oxygen levels and maintenance of oxygen homeostasis is crucial for cells. The hypoxic-sensitive regulation of gene expression allows information about the oxygen status to be converted into appropriate cellular responses. Although there is a core transcriptional pathway, the signalling cascade can be modified to allow diversity and specificity in the transcriptional output. In this Review, we discuss recent advances in our understanding of the mechanisms and factors that contribute to the observed diversity and specificity. A deeper knowledge about how hypoxic signalling is tuned will further our understanding of the cellular hypoxic response in normal physiology and how it becomes derailed in disease.

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Year:  2009        PMID: 19884889     DOI: 10.1038/nrg2665

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  141 in total

Review 1.  MicroRNAs: small RNAs with a big role in gene regulation.

Authors:  Lin He; Gregory J Hannon
Journal:  Nat Rev Genet       Date:  2004-07       Impact factor: 53.242

2.  Regulation of the hypoxia-inducible transcription factor 1alpha by the ubiquitin-proteasome pathway.

Authors:  P J Kallio; W J Wilson; S O'Brien; Y Makino; L Poellinger
Journal:  J Biol Chem       Date:  1999-03-05       Impact factor: 5.157

Review 3.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 4.  Transcriptional regulation and transformation by Myc proteins.

Authors:  Sovana Adhikary; Martin Eilers
Journal:  Nat Rev Mol Cell Biol       Date:  2005-08       Impact factor: 94.444

5.  Hypoxia inducible factor-alpha binding and ubiquitylation by the von Hippel-Lindau tumor suppressor protein.

Authors:  M E Cockman; N Masson; D R Mole; P Jaakkola; G W Chang; S C Clifford; E R Maher; C W Pugh; P J Ratcliffe; P H Maxwell
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

6.  Disruption of oxygen homeostasis underlies congenital Chuvash polycythemia.

Authors:  Sonny O Ang; Hua Chen; Kiichi Hirota; Victor R Gordeuk; Jaroslav Jelinek; Yongli Guan; Enli Liu; Adelina I Sergueeva; Galina Y Miasnikova; David Mole; Patrick H Maxwell; David W Stockton; Gregg L Semenza; Josef T Prchal
Journal:  Nat Genet       Date:  2002-11-04       Impact factor: 38.330

7.  RACK1 competes with HSP90 for binding to HIF-1alpha and is required for O(2)-independent and HSP90 inhibitor-induced degradation of HIF-1alpha.

Authors:  Ye V Liu; Jin H Baek; Huafeng Zhang; Roberto Diez; Robert N Cole; Gregg L Semenza
Journal:  Mol Cell       Date:  2007-01-26       Impact factor: 17.970

8.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

9.  Activation of hypoxia-inducible factor 1alpha: posttranscriptional regulation and conformational change by recruitment of the Arnt transcription factor.

Authors:  P J Kallio; I Pongratz; K Gradin; J McGuire; L Poellinger
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

10.  Transcriptome analysis of the response to chronic constant hypoxia in zebrafish hearts.

Authors:  Ines J Marques; Jelani T D Leito; Herman P Spaink; Janwillem Testerink; Richard T Jaspers; Frans Witte; Sjoerd van den Berg; Christoph P Bagowski
Journal:  J Comp Physiol B       Date:  2007-09-08       Impact factor: 2.200

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  144 in total

1.  ANGPTL4 induction by prostaglandin E2 under hypoxic conditions promotes colorectal cancer progression.

Authors:  Sun-Hee Kim; Yun-Yong Park; Sang-Wook Kim; Ju-Seog Lee; Dingzhi Wang; Raymond N DuBois
Journal:  Cancer Res       Date:  2011-09-21       Impact factor: 12.701

2.  Human enhancer of filamentation 1 Is a mediator of hypoxia-inducible factor-1alpha-mediated migration in colorectal carcinoma cells.

Authors:  Sun-Hee Kim; Dianren Xia; Sang-Wook Kim; Vijaykumar Holla; David G Menter; Raymond N Dubois
Journal:  Cancer Res       Date:  2010-05-04       Impact factor: 12.701

3.  Hypoxia induces the gene expression and extracellular transmission of persistent lymphocytic choriomeningitis virus.

Authors:  Jana Tomaskova; Ingrid Oveckova; Martina Labudova; Lubomira Lukacikova; Katarina Laposova; Juraj Kopacek; Silvia Pastorekova; Jaromir Pastorek
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

Review 4.  Oxygen levels and the regulation of cell adhesion in the nervous system: a control point for morphogenesis in development, disease and evolution?

Authors:  Kathryn L Crossin
Journal:  Cell Adh Migr       Date:  2012 Jan-Feb       Impact factor: 3.405

5.  Protective endogenous cyclic adenosine 5'-monophosphate signaling triggered by pemphigus autoantibodies.

Authors:  Volker Spindler; Franziska Vielmuth; Enno Schmidt; David S Rubenstein; Jens Waschke
Journal:  J Immunol       Date:  2010-10-29       Impact factor: 5.422

6.  Effects of β-glucan on ROS production and energy metabolism in yellow croaker (Pseudosciaena crocea) under acute hypoxic stress.

Authors:  Lin Zeng; Yong-Hong Wang; Chun-Xiang Ai; Jia-Lang Zheng; Chang-Wen Wu; Rong Cai
Journal:  Fish Physiol Biochem       Date:  2016-04-06       Impact factor: 2.794

7.  Expansion of human cardiac stem cells in physiological oxygen improves cell production efficiency and potency for myocardial repair.

Authors:  Tao-Sheng Li; Ke Cheng; Konstantinos Malliaras; Noriko Matsushita; Baiming Sun; Linda Marbán; Yiqiang Zhang; Eduardo Marbán
Journal:  Cardiovasc Res       Date:  2010-07-29       Impact factor: 10.787

Review 8.  Manipulation of neural progenitor fate through the oxygen sensing pathway.

Authors:  Yuan Xie; William E Lowry
Journal:  Methods       Date:  2017-08-31       Impact factor: 3.608

9.  Hypoxia and cell cycle regulation of the von Hippel-Lindau tumor suppressor.

Authors:  W Liu; H Xin; D T Eckert; J A Brown; J R Gnarra
Journal:  Oncogene       Date:  2010-08-30       Impact factor: 9.867

10.  Hypoxia-dependent sequestration of an oxygen sensor by a widespread structural motif can shape the hypoxic response--a predictive kinetic model.

Authors:  Bernhard Schmierer; Béla Novák; Christopher J Schofield
Journal:  BMC Syst Biol       Date:  2010-10-18
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