Literature DB >> 19880174

Density functional theory calculations and molecular dynamics simulations of the adsorption of biomolecules on graphene surfaces.

Wu Qin1, Xin Li, Wen-Wen Bian, Xiu-Juan Fan, Jing-Yao Qi.   

Abstract

There is increasing attention in the unique biological and medical properties of graphene, and it is expected that biomaterials incorporating graphene will be developed for the graphene-based drug delivery systems and biomedical devices. Despite the importance of biomolecules-graphene interactions, a detailed understanding of the adsorption mechanism and features of biomolecules onto the surfaces of graphene is lacking. To address this, we have performed density functional theory (DFT) and molecular dynamics (MD) methods exploring the adsorption geometries, adsorption energies, electronic band structures, adsorption isotherms, and adsorption dynamics of l-leucine (model biomolecule)/graphene composite system. DFT calculations confirmed the energetic stability of adsorption model and revealed that electronic structure of graphene can be controlled by the adsorption direction of l-leucine. MD simulations further investigate the potential energy and van der Waals energy for the interaction processes of l-leucine/graphene system at different temperatures and pressures. We find that the van der Waals interaction between the l-leucine and the graphene play a dominant role in the adsorption process under a certain range of temperature and pressure, and the l-leucine molecule could be adsorbed onto graphene spontaneously in aqueous solution.

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Year:  2009        PMID: 19880174     DOI: 10.1016/j.biomaterials.2009.10.013

Source DB:  PubMed          Journal:  Biomaterials        ISSN: 0142-9612            Impact factor:   12.479


  12 in total

Review 1.  Biological interactions of graphene-family nanomaterials: an interdisciplinary review.

Authors:  Vanesa C Sanchez; Ashish Jachak; Robert H Hurt; Agnes B Kane
Journal:  Chem Res Toxicol       Date:  2011-10-21       Impact factor: 3.739

2.  A computational study on the role of noncovalent interactions in the stability of polymer/graphene nanocomposites.

Authors:  S Güryel; M Alonso; B Hajgató; Y Dauphin; G Van Lier; P Geerlings; F De Proft
Journal:  J Mol Model       Date:  2017-02-02       Impact factor: 1.810

3.  Molecular vibrational spectroscopy characterization of epoxy graphene oxide from density functional calculations.

Authors:  Bo Liu; Hongjuan Sun; Tongjiang Peng; Guangfu Ji
Journal:  J Mol Model       Date:  2012-12-09       Impact factor: 1.810

4.  Graphene-Induced Adsorptive and Optical Artifacts During In Vitro Toxicology Assays.

Authors:  Megan A Creighton; J Rene Rangel-Mendez; Jiaxing Huang; Agnes B Kane; Robert H Hurt
Journal:  Small       Date:  2013-06-10       Impact factor: 13.281

5.  Nanodiamonds act as Trojan horse for intracellular delivery of metal ions to trigger cytotoxicity.

Authors:  Ying Zhu; Yu Zhang; Guosheng Shi; Jinrong Yang; Jichao Zhang; Wenxin Li; Aiguo Li; Renzhong Tai; Haiping Fang; Chunhai Fan; Qing Huang
Journal:  Part Fibre Toxicol       Date:  2015-02-05       Impact factor: 9.400

6.  Competitive binding of natural amphiphiles with graphene derivatives.

Authors:  Slaven Radic; Nicholas K Geitner; Ramakrishna Podila; Aleksandr Käkinen; Pengyu Chen; Pu Chun Ke; Feng Ding
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

7.  The enhanced anticoagulation for graphene induced by COOH(+) ion implantation.

Authors:  Xiaoqi Liu; Ye Cao; Mengli Zhao; Jianhua Deng; Xifei Li; Dejun Li
Journal:  Nanoscale Res Lett       Date:  2015-01-27       Impact factor: 4.703

8.  Graphene oxide scaffold accelerates cellular proliferative response and alveolar bone healing of tooth extraction socket.

Authors:  Erika Nishida; Hirofumi Miyaji; Akihito Kato; Hiroko Takita; Toshihiko Iwanaga; Takehito Momose; Kosuke Ogawa; Shusuke Murakami; Tsutomu Sugaya; Masamitsu Kawanami
Journal:  Int J Nanomedicine       Date:  2016-05-24

9.  Enhancement of interaction of L-929 cells with functionalized graphene via COOH+ ion implantation vs. chemical method.

Authors:  Meng-Li Zhao; Xiao-Qi Liu; Ye Cao; Xi-Fei Li; De-Jun Li; Xue-Liang Sun; Han-Qing Gu; Rong-Xin Wan
Journal:  Sci Rep       Date:  2016-11-15       Impact factor: 4.379

10.  Highly Sensitive and Selective Potassium Ion Detection Based on Graphene Hall Effect Biosensors.

Authors:  Xiangqi Liu; Chen Ye; Xiaoqing Li; Naiyuan Cui; Tianzhun Wu; Shiyu Du; Qiuping Wei; Li Fu; Jiancheng Yin; Cheng-Te Lin
Journal:  Materials (Basel)       Date:  2018-03-07       Impact factor: 3.623

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