Literature DB >> 19878694

Cross-contamination during processing of dried blood spots used for rapid diagnosis of HIV-1 infection of infants is rare and avoidable.

Caroline Mitchell1, Kelli Kraft, Do Peterson, Lisa Frenkel.   

Abstract

Dried blood spot (DBS) samples are a convenient way to collect infant blood for HIV-1 diagnostic testing. Minimizing the risk of false positives is critical for diagnostic tests. A protocol for processing and testing DBS for infant HIV-1 diagnosis was evaluated to identify the rate and source of false-positive results. DBS were created on Flinders Technology Associates (FTA) filter paper with 500 copies/punch (high) or 5000 copies/punch (very high) concentrations of HIV-1 DNA. Blank discs of filter paper punched after DBS samples were tested for carry-over of HIV-1 DNA using nested PCR for the pol region. No false positives were detected in the 40 series using high concentration DBS. In series with very high concentrations of HIV-1, 8/246 (3%) reactions were falsely positive. When tubes were spun prior to opening, contact with caps minimized, and spaces left between lanes of the gel, repeat second-round PCR of five false positives resulted in only one repeat false-positive PCR. This study outlines procedures that minimize false-positive results for nested PCR of HIV-1 DNA from DBS. 2009 Elsevier B.V. All rights reserved.

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Year:  2009        PMID: 19878694      PMCID: PMC2815236          DOI: 10.1016/j.jviromet.2009.10.016

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  7 in total

1.  Dried blood spots collected on filter paper: an international resource for the diagnosis and genetic characterization of human immunodeficiency virus type-1.

Authors:  S A Cassol; S Read; B G Weniger; P Gomez; N Lapointe; C Y Ou; P G Babu
Journal:  Mem Inst Oswaldo Cruz       Date:  1996 May-Jun       Impact factor: 2.743

2.  Simple, sensitive, and specific detection of human immunodeficiency virus type 1 subtype B DNA in dried blood samples for diagnosis in infants in the field.

Authors:  I A Beck; K D Drennan; A J Melvin; K M Mohan; A M Herz; J Alarcón; J Piscoya; C Velázquez; L M Frenkel
Journal:  J Clin Microbiol       Date:  2001-01       Impact factor: 5.948

3.  Low risk of contamination with automated and manual excision of dried blood spots for HIV DNA PCR testing in the routine laboratory.

Authors:  Glenn A Driver; Janet C Patton; Jackie Moloi; Wendy S Stevens; Gayle G Sherman
Journal:  J Virol Methods       Date:  2007-09-12       Impact factor: 2.014

4.  Diminished human immunodeficiency virus type 1 DNA yield from dried blood spots after storage in a humid incubator at 37 degrees C compared to -20 degrees C.

Authors:  Caroline Mitchell; Cheryl Jennings; Donald Brambilla; Grace Aldrovandi; Angela Martin Amedee; Ingrid Beck; James W Bremer; Robert Coombs; Don Decker; Susan Fiscus; Joseph Fitzgibbon; Katherine Luzuriaga; John Moye; Paul Palumbo; Patricia Reichelderfer; Mohan Somasundaran; Wendy Stevens; Lisa Frenkel
Journal:  J Clin Microbiol       Date:  2008-07-09       Impact factor: 5.948

5.  Early antiretroviral therapy and mortality among HIV-infected infants.

Authors:  Avy Violari; Mark F Cotton; Diana M Gibb; Abdel G Babiker; Jan Steyn; Shabir A Madhi; Patrick Jean-Philippe; James A McIntyre
Journal:  N Engl J Med       Date:  2008-11-20       Impact factor: 91.245

6.  Persistence of human immunodeficiency virus type 1 subtype B DNA in dried-blood samples on FTA filter paper.

Authors:  Chung-Chen Li; Ingrid A Beck; Kristy D Seidel; Lisa M Frenkel
Journal:  J Clin Microbiol       Date:  2004-08       Impact factor: 5.948

7.  HIV-1 drug resistance genotyping from dried blood spots stored for 1 year at 4 degrees C.

Authors:  Ae S Youngpairoj; Silvina Masciotra; Carolina Garrido; Natalia Zahonero; Carmen de Mendoza; J Gerardo García-Lerma
Journal:  J Antimicrob Chemother       Date:  2008-03-15       Impact factor: 5.790

  7 in total
  7 in total

1.  Laser cutting eliminates nucleic acid cross-contamination in dried-blood-spot processing.

Authors:  Sean C Murphy; Glenda Daza; Ming Chang; Robert Coombs
Journal:  J Clin Microbiol       Date:  2012-10-10       Impact factor: 5.948

2.  Prospective evaluation of diagnostic accuracy of dried blood spots from finger prick samples for determination of HIV-1 load with the NucliSENS Easy-Q HIV-1 version 2.0 assay in Malawi.

Authors:  Emmanuel Fajardo; Carol A Metcalf; Pascale Chaillet; Lucia Aleixo; Pieter Pannus; Isabella Panunzi; Laura Triviño; Tom Ellman; Andrew Likaka; Reuben Mwenda
Journal:  J Clin Microbiol       Date:  2014-02-05       Impact factor: 5.948

3.  Dried Blood Spot Methodology in Combination With Liquid Chromatography/Tandem Mass Spectrometry Facilitates the Monitoring of Teriflunomide.

Authors:  Aziz Filali-Ansary; Catherine Lunven; Sandrine Turpault; Yann-Joel Beyer; Amy OʼBrien; Astrid Delfolie; Neli Boyanova; Ger-Jan Sanderink; Francesca Baldinetti
Journal:  Ther Drug Monit       Date:  2016-08       Impact factor: 3.681

Review 4.  Dried Blood Spots for Global Health Diagnostics and Surveillance: Opportunities and Challenges.

Authors:  Mark D Lim
Journal:  Am J Trop Med Hyg       Date:  2018-06-28       Impact factor: 2.345

5.  Field Suitability and Diagnostic Accuracy of the Biocentric Open Real-Time PCR Platform for Dried Blood Spot-Based HIV Viral Load Quantification in Eswatini.

Authors:  Bernhard Kerschberger; Nombuso Ntshalintshali; Qhubekani Mpala; Paola Andrea Díaz Uribe; Gugu Maphalala; Sydney Kalombola; Addissu Bekele Telila; Tiwonge Chawinga; Mukelo Maphalala; Aditi Jani; Nomcebo Phugwayo; Roberto de la Tour; Nomxolise Nyoni; Javier Goiri; Sindisiwe Dlamini; Iza Ciglenecki; Emmanuel Fajardo
Journal:  J Acquir Immune Defic Syndr       Date:  2019-09-01       Impact factor: 3.731

6.  Antiviral resistance and correlates of virologic failure in the first cohort of HIV-infected children gaining access to structured antiretroviral therapy in Lima, Peru: a cross-sectional analysis.

Authors:  Barbara A Rath; Max von Kleist; Maria E Castillo; Lenka Kolevic; Patricia Caballero; Giselle Soto-Castellares; Angela M Amedee; James E Robinson; David K Katzenstein; Russell B Van Dyke; Richard A Oberhelman
Journal:  BMC Infect Dis       Date:  2013-01-02       Impact factor: 3.090

7.  The use of dried cerebrospinal fluid filter paper spots as a substrate for PCR diagnosis of the aetiology of bacterial meningitis in the Lao PDR.

Authors:  I Elliott; S Dittrich; D Paris; A Sengduanphachanh; P Phoumin; P N Newton
Journal:  Clin Microbiol Infect       Date:  2013-06-06       Impact factor: 8.067

  7 in total

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