Literature DB >> 30057506

On the Application of Multivariate Statistical and Data Mining Analyses to Data in Neuroscience.

Paul F Smith1.   

Abstract

Research in neuroscience, whether at the level of genes, proteins, neurons or behavior, almost always involves the interaction of multiple variables, and yet many areas of neuroscience employ univariate statistical analyses almost exclusively. Since multiple variables often work together to produce a neuronal or behavioral effect, the use of univariate statistical procedures, analyzing one variable at a time, limits the ability of studies to reveal how interactions between different variables may determine a particular outcome. Multivariate statistical and data mining methods afford the opportunity to analyze many variables together, in order to understand how they function as a system, and how this system may change as a result of a disease or a drug. The aim of this review is to provide a succinct guide to methods such as linear discriminant analysis, support vector machines, principal component and factor analysis, cluster analysis, multiple linear regression, and random forest regression and classification, which have been used in circumscribed areas of neuroscience research, but which could be used more widely.

Keywords:  R; SPSS 24; data mining; multivariate statistical analyses; neuroscience

Year:  2018        PMID: 30057506      PMCID: PMC6057756     

Source DB:  PubMed          Journal:  J Undergrad Neurosci Educ        ISSN: 1544-2896


  18 in total

1.  What you see may not be what you get: a brief, nontechnical introduction to overfitting in regression-type models.

Authors:  Michael A Babyak
Journal:  Psychosom Med       Date:  2004 May-Jun       Impact factor: 4.312

2.  Artificial neural network: a new diagnostic posturographic tool for disorders of stance.

Authors:  Siegbert Krafczyk; Simon Tietze; Walter Swoboda; Peter Valkovic; Thomas Brandt
Journal:  Clin Neurophysiol       Date:  2006-06-22       Impact factor: 3.708

3.  Multivariate semiparametric spatial methods for imaging data.

Authors:  Huaihou Chen; Guanqun Cao; Ronald A Cohen
Journal:  Biostatistics       Date:  2017-04-01       Impact factor: 5.899

4.  Statistical analysis in pharmacology is not always BO.

Authors:  Paul F Smith
Journal:  Trends Pharmacol Sci       Date:  2012-09-19       Impact factor: 14.819

Review 5.  A Guerilla Guide to Common Problems in 'Neurostatistics': Essential Statistical Topics in Neuroscience.

Authors:  Paul F Smith
Journal:  J Undergrad Neurosci Educ       Date:  2017-11-15

6.  Performance in anxiety and spatial memory tests following bilateral vestibular loss in the rat and effects of anxiolytic and anxiogenic drugs.

Authors:  Yiwen Zheng; Irene Cheung; Paul F Smith
Journal:  Behav Brain Res       Date:  2012-07-20       Impact factor: 3.332

7.  Ethovision™ analysis of open field behaviour in rats following bilateral vestibular loss.

Authors:  Phillip Aitken; Yiwen Zheng; Paul F Smith
Journal:  J Vestib Res       Date:  2017       Impact factor: 2.435

8.  Further studies of the effects of aging on arginine metabolites in the rat vestibular nucleus and cerebellum.

Authors:  P Liu; N Gupta; Y Jing; N D Collie; H Zhang; P F Smith
Journal:  Neuroscience       Date:  2017-02-24       Impact factor: 3.590

9.  Brain Metabolic Changes in Rats following Acoustic Trauma.

Authors:  Jun He; Yejin Zhu; Jiye Aa; Paul F Smith; Dirk De Ridder; Guangji Wang; Yiwen Zheng
Journal:  Front Neurosci       Date:  2017-03-24       Impact factor: 4.677

10.  Glutamate receptor subunit and calmodulin kinase II expression, with and without T maze training, in the rat hippocampus following bilateral vestibular deafferentation.

Authors:  Yiwen Zheng; Georgina Wilson; Lucy Stiles; Paul F Smith
Journal:  PLoS One       Date:  2013-02-07       Impact factor: 3.240

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  1 in total

Review 1.  Hearing loss versus vestibular loss as contributors to cognitive dysfunction.

Authors:  Paul F Smith
Journal:  J Neurol       Date:  2021-01-02       Impact factor: 4.849

  1 in total

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