Literature DB >> 19845628

The great billion-year war between ribosome- and capsid-encoding organisms (cells and viruses) as the major source of evolutionary novelties.

Patrick Forterre1, David Prangishvili.   

Abstract

Our conceptions on the origin, nature, and role of viruses have been shaken recently by several independent lines of research. There are many reasons to believe now that viruses are more ancient than modern cells and have always been more abundant and diverse than their cellular targets. Viruses can be defined as capsid-encoding organisms that transform their "host" cell into a viral factory. If capsid-encoding organisms (viruses) and ribosome-encoding organisms (cells) are the major types of living entities on our planet, it seems logical to conclude that their conflict has been a major engine of biological evolution (in the framework of natural selection). In particular, many novelties first selected in the viral world might have been transferred to cells as a consequence of the continuous flow of viral genes into cellular genomes. We discuss recent observations and hypotheses suggesting that viruses have played a major role at different stages of biological evolution, such as the RNA to DNA transition, the origin of the eukaryotic nucleus, or, alternatively, the origin of unique features in multicellular macrobes.

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Year:  2009        PMID: 19845628     DOI: 10.1111/j.1749-6632.2009.04993.x

Source DB:  PubMed          Journal:  Ann N Y Acad Sci        ISSN: 0077-8923            Impact factor:   5.691


  58 in total

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Journal:  Curr Opin Virol       Date:  2011-11       Impact factor: 7.090

2.  Virophages question the existence of satellites.

Authors:  Christelle Desnues; Didier Raoult
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Journal:  World J Biol Chem       Date:  2013-11-26

4.  Evolutionary dynamics of the prokaryotic adaptive immunity system CRISPR-Cas in an explicit ecological context.

Authors:  Jaime Iranzo; Alexander E Lobkovsky; Yuri I Wolf; Eugene V Koonin
Journal:  J Bacteriol       Date:  2013-06-21       Impact factor: 3.490

5.  Stable coevolutionary regimes for genetic parasites and their hosts: you must differ to coevolve.

Authors:  Faina Berezovskaya; Georgy P Karev; Mikhail I Katsnelson; Yuri I Wolf; Eugene V Koonin
Journal:  Biol Direct       Date:  2018-12-14       Impact factor: 4.540

6.  Defense islands in bacterial and archaeal genomes and prediction of novel defense systems.

Authors:  Kira S Makarova; Yuri I Wolf; Sagi Snir; Eugene V Koonin
Journal:  J Bacteriol       Date:  2011-09-09       Impact factor: 3.490

7.  When Competing Viruses Unify: Evolution, Conservation, and Plasticity of Genetic Identities.

Authors:  Luis P Villarreal; Guenther Witzany
Journal:  J Mol Evol       Date:  2015-05-27       Impact factor: 2.395

Review 8.  The LUCA and its complex virome.

Authors:  Mart Krupovic; Valerian V Dolja; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2020-07-14       Impact factor: 60.633

9.  Elaborate security TRAINing to fight against expression of genomic junk.

Authors:  Eugene V Koonin
Journal:  Cell Cycle       Date:  2013-01-31       Impact factor: 4.534

10.  Gene similarity networks provide tools for understanding eukaryote origins and evolution.

Authors:  David Alvarez-Ponce; Philippe Lopez; Eric Bapteste; James O McInerney
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-01       Impact factor: 11.205

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