Literature DB >> 19836944

Adenylate-forming enzymes.

Stefan Schmelz1, James H Naismith.   

Abstract

Thioesters, amides, and esters are common chemical building blocks in a wide array of natural products. The formation of these bonds can be catalyzed in a variety of ways. For chemists, the use of an activating group is a common strategy and adenylate enzymes are exemplars of this approach. Adenylating enzymes activate the otherwise unreactive carboxylic acid by transforming the normal hydroxyl leaving group into adenosine monophosphate. Recently there have been a number of studies of such enzymes and in this review we suggest a new classification scheme. The review highlights the diversity in enzyme fold, active site architecture, and metal coordination that has evolved to catalyze this particular reaction.

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Year:  2009        PMID: 19836944      PMCID: PMC3313645          DOI: 10.1016/j.sbi.2009.09.004

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  31 in total

1.  Crystal structure of yeast acetyl-coenzyme A synthetase in complex with AMP.

Authors:  Gerwald Jogl; Liang Tong
Journal:  Biochemistry       Date:  2004-02-17       Impact factor: 3.162

2.  Kinetic studies of leucyl transfer RNA synthetase from bakers' yeast. Order of addition of substrates and release of products.

Authors:  C S Lin; R Irwin; J G Chirikjian
Journal:  J Biol Chem       Date:  1975-12-25       Impact factor: 5.157

3.  The 1.75 A crystal structure of acetyl-CoA synthetase bound to adenosine-5'-propylphosphate and coenzyme A.

Authors:  Andrew M Gulick; Vincent J Starai; Alexander R Horswill; Kristen M Homick; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2003-03-18       Impact factor: 3.162

4.  Reconstruction by site-directed mutagenesis of the transition state for the activation of tyrosine by the tyrosyl-tRNA synthetase: a mobile loop envelopes the transition state in an induced-fit mechanism.

Authors:  A R Fersht; J W Knill-Jones; H Bedouelle; G Winter
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

Review 5.  Eleven down and nine to go.

Authors:  S Cusack
Journal:  Nat Struct Biol       Date:  1995-10

6.  The fadD gene of Escherichia coli K12 is located close to rnd at 39.6 min of the chromosomal map and is a new member of the AMP-binding protein family.

Authors:  M Fulda; E Heinz; F P Wolter
Journal:  Mol Gen Genet       Date:  1994-02

7.  Mutation of lysine 233 to alanine introduces positive cooperativity into tyrosyl-tRNA synthetase.

Authors:  E A First; A R Fersht
Journal:  Biochemistry       Date:  1993-12-14       Impact factor: 3.162

8.  The structural basis for seryl-adenylate and Ap4A synthesis by seryl-tRNA synthetase.

Authors:  H Belrhali; A Yaremchuk; M Tukalo; C Berthet-Colominas; B Rasmussen; P Bösecke; O Diat; S Cusack
Journal:  Structure       Date:  1995-04-15       Impact factor: 5.006

Review 9.  The chemical biology of modular biosynthetic enzymes.

Authors:  Jordan L Meier; Michael D Burkart
Journal:  Chem Soc Rev       Date:  2009-03-27       Impact factor: 54.564

10.  Chemical induction of silent biosynthetic pathway transcription in Aspergillus niger.

Authors:  K M Fisch; A F Gillaspy; M Gipson; J C Henrikson; A R Hoover; L Jackson; F Z Najar; H Wägele; R H Cichewicz
Journal:  J Ind Microbiol Biotechnol       Date:  2009-06-12       Impact factor: 3.346

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  58 in total

1.  Structural Insights into Anthranilate Priming during Type II Polyketide Biosynthesis.

Authors:  David R Jackson; Stephanie S Tu; MyChi Nguyen; Jesus F Barajas; Andrew J Schaub; Daniel Krug; Dominik Pistorius; Ray Luo; Rolf Müller; Shiou-Chuan Tsai
Journal:  ACS Chem Biol       Date:  2015-11-03       Impact factor: 5.100

Review 2.  Development and application of bond cleavage reactions in bioorthogonal chemistry.

Authors:  Jie Li; Peng R Chen
Journal:  Nat Chem Biol       Date:  2016-03       Impact factor: 15.040

Review 3.  Adenylating enzymes in Mycobacterium tuberculosis as drug targets.

Authors:  Benjamin P Duckworth; Kathryn M Nelson; Courtney C Aldrich
Journal:  Curr Top Med Chem       Date:  2012       Impact factor: 3.295

4.  Insight into Structure-Function Relationships and Inhibition of the Fatty Acyl-AMP Ligase (FadD32) Orthologs from Mycobacteria.

Authors:  Valérie Guillet; Ségolène Galandrin; Laurent Maveyraud; Simon Ladevèze; Vincent Mariaule; Cécile Bon; Nathalie Eynard; Mamadou Daffé; Hedia Marrakchi; Lionel Mourey
Journal:  J Biol Chem       Date:  2016-02-21       Impact factor: 5.157

5.  Acetylation of acetyl-CoA synthetase from Mycobacterium tuberculosis leads to specific inactivation of the adenylation reaction.

Authors:  Tahel Noy; Hua Xu; John S Blanchard
Journal:  Arch Biochem Biophys       Date:  2014-04-18       Impact factor: 4.013

Review 6.  Structural, functional and evolutionary diversity of 4-coumarate-CoA ligase in plants.

Authors:  Santosh G Lavhale; Raviraj M Kalunke; Ashok P Giri
Journal:  Planta       Date:  2018-08-04       Impact factor: 4.116

7.  Design, synthesis, and biological evaluation of α-hydroxyacyl-AMS inhibitors of amino acid adenylation enzymes.

Authors:  Tony D Davis; Poornima Mohandas; Maria I Chiriac; Glennon V Bythrow; Luis E N Quadri; Derek S Tan
Journal:  Bioorg Med Chem Lett       Date:  2016-09-16       Impact factor: 2.823

8.  Investigation and conformational analysis of fluorinated nucleoside antibiotics targeting siderophore biosynthesis.

Authors:  Surendra Dawadi; Kishore Viswanathan; Helena I Boshoff; Clifton E Barry; Courtney C Aldrich
Journal:  J Org Chem       Date:  2015-04-30       Impact factor: 4.354

9.  Role of 4-hydroxybutyrate-CoA synthetase in the CO2 fixation cycle in thermoacidophilic archaea.

Authors:  Aaron S Hawkins; Yejun Han; Robert K Bennett; Michael W W Adams; Robert M Kelly
Journal:  J Biol Chem       Date:  2012-12-20       Impact factor: 5.157

10.  MoCps1 is important for conidiation, conidial morphology and virulence in Magnaporthe oryzae.

Authors:  Yu Wang; Dan He; Yu Chu; Yu-Shan Zuo; Xiao-Wen Xu; Xiao-Lin Chen; Wen-Sheng Zhao; Yan Zhang; Jun Yang; You-Liang Peng
Journal:  Curr Genet       Date:  2016-03-15       Impact factor: 3.886

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