Literature DB >> 19834166

Bubble sets: revealing set relations with isocontours over existing visualizations.

Christopher Collins1, Gerald Penn, Sheelagh Carpendale.   

Abstract

While many data sets contain multiple relationships, depicting more than one data relationship within a single visualization is challenging. We introduce Bubble Sets as a visualization technique for data that has both a primary data relation with a semantically significant spatial organization and a significant set membership relation in which members of the same set are not necessarily adjacent in the primary layout. In order to maintain the spatial rights of the primary data relation, we avoid layout adjustment techniques that improve set cluster continuity and density. Instead, we use a continuous, possibly concave, isocontour to delineate set membership, without disrupting the primary layout. Optimizations minimize cluster overlap and provide for calculation of the isocontours at interactive speeds. Case studies show how this technique can be used to indicate multiple sets on a variety of common visualizations.

Year:  2009        PMID: 19834166     DOI: 10.1109/TVCG.2009.122

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  16 in total

1.  RuleBender: a visual interface for rule-based modeling.

Authors:  Wen Xu; Adam M Smith; James R Faeder; G Elisabeta Marai
Journal:  Bioinformatics       Date:  2011-04-14       Impact factor: 6.937

2.  Splatterplots: overcoming overdraw in scatter plots.

Authors:  Adrian Mayorga; Michael Gleicher
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-09       Impact factor: 4.579

3.  UpSet: Visualization of Intersecting Sets.

Authors:  Alexander Lex; Nils Gehlenborg; Hendrik Strobelt; Romain Vuillemot; Hanspeter Pfister
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

4.  Entourage: visualizing relationships between biological pathways using contextual subsets.

Authors:  Alexander Lex; Christian Partl; Denis Kalkofen; Marc Streit; Samuel Gratzl; Anne Mai Wassermann; Dieter Schmalstieg; Hanspeter Pfister
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-12       Impact factor: 4.579

5.  RuleBender: integrated modeling, simulation and visualization for rule-based intracellular biochemistry.

Authors:  Adam M Smith; Wen Xu; Yao Sun; James R Faeder; G Elisabeta Marai
Journal:  BMC Bioinformatics       Date:  2012-05-18       Impact factor: 3.169

6.  HiTSEE KNIME: a visualization tool for hit selection and analysis in high-throughput screening experiments for the KNIME platform.

Authors:  Hendrik Strobelt; Enrico Bertini; Joachim Braun; Oliver Deussen; Ulrich Groth; Thomas U Mayer; Dorit Merhof
Journal:  BMC Bioinformatics       Date:  2012-05-18       Impact factor: 3.169

7.  Visual analysis of biological data-knowledge networks.

Authors:  Corinna Vehlow; David P Kao; Michael R Bristow; Lawrence E Hunter; Daniel Weiskopf; Carsten Görg
Journal:  BMC Bioinformatics       Date:  2015-04-29       Impact factor: 3.169

8.  enRoute: dynamic path extraction from biological pathway maps for exploring heterogeneous experimental datasets.

Authors:  Christian Partl; Alexander Lex; Marc Streit; Denis Kalkofen; Karl Kashofer; Dieter Schmalstieg
Journal:  BMC Bioinformatics       Date:  2013-11-12       Impact factor: 3.169

9.  XCluSim: a visual analytics tool for interactively comparing multiple clustering results of bioinformatics data.

Authors:  Sehi L'Yi; Bongkyung Ko; DongHwa Shin; Young-Joon Cho; Jaeyong Lee; Bohyoung Kim; Jinwook Seo
Journal:  BMC Bioinformatics       Date:  2015-08-13       Impact factor: 3.169

10.  Extended LineSets: a visualization technique for the interactive inspection of biological pathways.

Authors:  Francesco Paduano; Angus Graeme Forbes
Journal:  BMC Proc       Date:  2015-08-13
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.