Literature DB >> 19822511

Gene expression profiles as predictors of poor outcomes in stage II colorectal cancer: A systematic review and meta-analysis.

An-Ting T Lu1, Shelley R Salpeter, Anthony E Reeve, Steven Eschrich, Patrick G Johnston, Alain J Barrier, Francois Bertucci, Nicholas S Buckley, Edwin E Salpeter, Albert Y Lin.   

Abstract

PURPOSE: The use of adjuvant therapy in stage II colorectal cancer (CRC) remains controversial. There is a need to identify more effective predictors than the traditional staging system to aid therapeutic decision-making. We performed a systematic review and meta-analysis of gene expression profiles (GEPs) to assess their utility for risk stratification and prediction of poor outcomes in stage II CRC. PATIENTS AND METHODS: We performed a comprehensive literature search through December 2007. Studies were included if they reported GEP-based assays in patients with stage II CRC, and either subsequent cancer recurrence or death within 3 years. The prognostic likelihood ratio (LR) and odds ratio (OR) were calculated with 95% confidence intervals and pooled using the fixed-effects method. The weighted average sensitivity, specificity, and accuracy were also reported.
RESULTS: Eight cohorts involving 271 patients contributed to the analysis. The average accuracy, sensitivity, and specificity were 81.9%, 76.2%, and 84.5%, respectively, with a prognostic LR of 4.7 (95% CI, 3.2-6.8) and a prognostic OR of 15.1 (95% CI, 7.9-28.6). No evidence for significant interstudy heterogeneity was noted in either analysis. Subgroup analysis found no difference in results for the prediction of cancer recurrence or death.
CONCLUSION: This analysis demonstrates the promising potential of using GEP assays as predictors of poor outcomes in stage II CRC, such as cancer recurrence or death. To maximize their utility and availability, further studies will be needed to identify and validate specific gene signatures for poor prognosis in stage II CRC.

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Year:  2009        PMID: 19822511     DOI: 10.3816/CCC.2009.n.035

Source DB:  PubMed          Journal:  Clin Colorectal Cancer        ISSN: 1533-0028            Impact factor:   4.481


  9 in total

Review 1.  Prognostic and predictive markers in stage II colon cancer: is there a role for gene expression profiling?

Authors:  Robin K Kelley; Alan P Venook
Journal:  Clin Colorectal Cancer       Date:  2011-04-22       Impact factor: 4.481

2.  Semi-supervised learning improves gene expression-based prediction of cancer recurrence.

Authors:  Mingguang Shi; Bing Zhang
Journal:  Bioinformatics       Date:  2011-09-04       Impact factor: 6.937

3.  Prior knowledge transfer across transcriptional data sets and technologies using compositional statistics yields new mislabelled ovarian cell line.

Authors:  Jaine K Blayney; Timothy Davison; Nuala McCabe; Steven Walker; Karen Keating; Thomas Delaney; Caroline Greenan; Alistair R Williams; W Glenn McCluggage; Amanda Capes-Davis; D Paul Harkin; Charlie Gourley; Richard D Kennedy
Journal:  Nucleic Acids Res       Date:  2016-06-28       Impact factor: 16.971

Review 4.  Clinical value of prognosis gene expression signatures in colorectal cancer: a systematic review.

Authors:  Rebeca Sanz-Pamplona; Antoni Berenguer; David Cordero; Samantha Riccadonna; Xavier Solé; Marta Crous-Bou; Elisabet Guinó; Xavier Sanjuan; Sebastiano Biondo; Antonio Soriano; Giuseppe Jurman; Gabriel Capella; Cesare Furlanello; Victor Moreno
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

5.  ColoFinder: a prognostic 9-gene signature improves prognosis for 871 stage II and III colorectal cancer patients.

Authors:  Mingguang Shi; Jianmin He
Journal:  PeerJ       Date:  2016-03-14       Impact factor: 2.984

6.  A 19-Gene expression signature as a predictor of survival in colorectal cancer.

Authors:  Nurul Ainin Abdul Aziz; Norfilza M Mokhtar; Roslan Harun; Md Manir Hossain Mollah; Isa Mohamed Rose; Ismail Sagap; Azmi Mohd Tamil; Wan Zurinah Wan Ngah; Rahman Jamal
Journal:  BMC Med Genomics       Date:  2016-09-08       Impact factor: 3.063

7.  Is Nasal Polyposis Related to Levels of Serum Vitamin D and Vitamin D Receptor Gene Expression?

Authors:  Omer Erdag; Mahfuz Turan; Rıfkı Ucler; Mehmet Berkoz; Mehmet Fatih Garca; Nazım Bozan; Ahmet Faruk Kıroglu; Hakan Cankaya
Journal:  Med Sci Monit       Date:  2016-11-29

8.  Glandular orientation and shape determined by computational pathology could identify aggressive tumor for early colon carcinoma: a triple-center study.

Authors:  Meng-Yao Ji; Lei Yuan; Shi-Min Lu; Meng-Ting Gao; Zhi Zeng; Na Zhan; Yi-Juan Ding; Zheng-Ru Liu; Ping-Xiao Huang; Cheng Lu; Wei-Guo Dong
Journal:  J Transl Med       Date:  2020-03-16       Impact factor: 5.531

9.  Somatic POLE exonuclease domain mutations elicit enhanced intratumoral immune responses in stage II colorectal cancer.

Authors:  Shaobo Mo; Xiaoji Ma; Yaqi Li; Long Zhang; Ting Hou; Han Han-Zhang; Juanjuan Qian; Sanjun Cai; Dan Huang; Junjie Peng
Journal:  J Immunother Cancer       Date:  2020-08       Impact factor: 13.751

  9 in total

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