Literature DB >> 19815078

A new methodology for the estimation of fiber populations in the white matter of the brain with the Funk-Radon transform.

Antonio Tristán-Vega1, Carl-Fredrik Westin, Santiago Aja-Fernández.   

Abstract

The Funk-Radon Transform (FRT) is a powerful tool for the estimation of fiber populations with High Angular Resolution Diffusion Imaging (HARDI). It is used in Q-Ball imaging (QBI), and other HARDI techniques such as the recent Orientation Probability Density Transform (OPDT), to estimate fiber populations with very few restrictions on the diffusion model. The FRT consists in the integration of the attenuation signal, sampled by the MRI scanner on the unit sphere, along equators orthogonal to the directions of interest. It is easily proved that this calculation is equivalent to the integration of the diffusion propagator along such directions, although a characteristic blurring with a Bessel kernel is introduced. Under a different point of view, the FRT can be seen as an efficient way to compute the angular part of the integral of the attenuation signal in the plane orthogonal to each direction of the diffusion propagator. In this paper, Stoke's theorem is used to prove that the FRT can in fact be used to compute accurate estimates of the true integrals defining the functions of interest in HARDI, keeping the diffusion model as little restrictive as possible. Varying the assumptions on the attenuation signal, we derive new estimators of fiber orientations, generalizing both Q-Balls and the OPDT. Extensive experiments with both synthetic and real data have been intended to show that the new techniques improve existing ones in many situations.

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Year:  2009        PMID: 19815078      PMCID: PMC4026251          DOI: 10.1016/j.neuroimage.2009.09.070

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  31 in total

1.  Multiple Q-shell ODF reconstruction in Q-ball imaging.

Authors:  Iman Aganj; Christophe Lenglet; Guillermo Sapiro; Essa Yacoub; Kamil Ugurbil; Noam Harel
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

2.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

3.  Q-ball reconstruction of multimodal fiber orientations using the spherical harmonic basis.

Authors:  Christopher P Hess; Pratik Mukherjee; Eric T Han; Duan Xu; Daniel B Vigneron
Journal:  Magn Reson Med       Date:  2006-07       Impact factor: 4.668

4.  A unified computational framework for deconvolution to reconstruct multiple fibers from diffusion weighted MRI.

Authors:  Bing Jian; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

5.  Estimation of fiber orientation probability density functions in high angular resolution diffusion imaging.

Authors:  Antonio Tristán-Vega; Carl-Fredrik Westin; Santiago Aja-Fernández
Journal:  Neuroimage       Date:  2009-04-22       Impact factor: 6.556

6.  Optimal acquisition schemes in high angular resolution diffusion weighted imaging.

Authors:  V Prckovska; A F Roebroeck; W L P M Pullens; A Vilanova; B M ter Haar Romeny
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Biexponential apparent diffusion coefficients in prostate cancer.

Authors:  Hiroshi Shinmoto; Koichi Oshio; Akihiro Tanimoto; Nobuya Higuchi; Shigeo Okuda; Sachio Kuribayashi; Robert V Mulkern
Journal:  Magn Reson Imaging       Date:  2008-09-02       Impact factor: 2.546

8.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI.

Authors:  P J Basser; C Pierpaoli
Journal:  J Magn Reson B       Date:  1996-06

9.  Biexponential diffusion attenuation in various states of brain tissue: implications for diffusion-weighted imaging.

Authors:  T Niendorf; R M Dijkhuizen; D G Norris; M van Lookeren Campagne; K Nicolay
Journal:  Magn Reson Med       Date:  1996-12       Impact factor: 4.668

10.  ODF RECONSTRUCTION IN Q-BALL IMAGING WITH SOLID ANGLE CONSIDERATION.

Authors:  Iman Aganj; Christophe Lenglet; Guillermo Sapiro
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2009 Jun-Jul
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  13 in total

1.  Probabilistic ODF estimation from reduced HARDI data with sparse regularization.

Authors:  Antonio Tristán-Vega; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  Optimal real-time estimation in diffusion tensor imaging.

Authors:  Pablo Casaseca-de-la-Higuera; Antonio Tristán-Vega; Santiago Aja-Fernández; Carlos Alberola-López; Carl-Fredrik Westin; Raúl San José Estépar
Journal:  Magn Reson Imaging       Date:  2012-02-02       Impact factor: 2.546

3.  Least squares for diffusion tensor estimation revisited: propagation of uncertainty with Rician and non-Rician signals.

Authors:  Antonio Tristán-Vega; Santiago Aja-Fernández; Carl-Fredrik Westin
Journal:  Neuroimage       Date:  2011-10-08       Impact factor: 6.556

4.  Estimation of the CSA-ODF using Bayesian compressed sensing of multi-shell HARDI.

Authors:  Julio M Duarte-Carvajalino; Christophe Lenglet; Junqian Xu; Essa Yacoub; Kamil Ugurbil; Steen Moeller; Lawrence Carin; Guillermo Sapiro
Journal:  Magn Reson Med       Date:  2013-12-12       Impact factor: 4.668

5.  Fiber ball imaging.

Authors:  Jens H Jensen; G Russell Glenn; Joseph A Helpern
Journal:  Neuroimage       Date:  2015-10-01       Impact factor: 6.556

6.  Empirical consideration of the effects of acquisition parameters and analysis model on clinically feasible q-ball imaging.

Authors:  Kurt G Schilling; Vishwesh Nath; Justin A Blaber; Prasanna Parvathaneni; Adam W Anderson; Bennett A Landman
Journal:  Magn Reson Imaging       Date:  2017-04-24       Impact factor: 2.546

7.  Linear transforms for Fourier data on the sphere: application to high angular resolution diffusion MRI of the brain.

Authors:  Justin P Haldar; Richard M Leahy
Journal:  Neuroimage       Date:  2013-01-24       Impact factor: 6.556

8.  How does B-value affect HARDI reconstruction using clinical diffusion MRI data?

Authors:  Sangma Xie; Nianming Zuo; Liqing Shang; Ming Song; Lingzhong Fan; Tianzi Jiang
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

9.  Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization.

Authors:  Erick J Canales-Rodríguez; Alessandro Daducci; Stamatios N Sotiropoulos; Emmanuel Caruyer; Santiago Aja-Fernández; Joaquim Radua; Jesús M Yurramendi Mendizabal; Yasser Iturria-Medina; Lester Melie-García; Yasser Alemán-Gómez; Jean-Philippe Thiran; Salvador Sarró; Edith Pomarol-Clotet; Raymond Salvador
Journal:  PLoS One       Date:  2015-10-15       Impact factor: 3.240

10.  Q-ball of inferior fronto-occipital fasciculus and beyond.

Authors:  Eduardo Caverzasi; Nico Papinutto; Bagrat Amirbekian; Mitchel S Berger; Roland G Henry
Journal:  PLoS One       Date:  2014-06-19       Impact factor: 3.240

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