Literature DB >> 19813005

Searching for signals in the noise: metabolomics in chemical ecology.

Emily K Prince1, Georg Pohnert.   

Abstract

Chemically mediated interactions between organisms influence ecosystem structure, making it crucial for ecologists to understand these interactions. Advances in chemical ecology have often been closely linked to advances in analytical chemistry techniques. One recent development is the use of metabolomics to address questions in chemical ecology. Although metabolomics has much to offer this field, it is not without drawbacks. Here we consider how metabolomics techniques can supplement the traditional bioassay-guided fractionation approach to chemical ecology. We focus on specific examples that illustrate the advantages that metabolomic methods can provide over other methods in order to understand chemically mediated interactions between organisms.

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Year:  2009        PMID: 19813005     DOI: 10.1007/s00216-009-3162-5

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  21 in total

1.  Phytochemical diversity drives plant-insect community diversity.

Authors:  Lora A Richards; Lee A Dyer; Matthew L Forister; Angela M Smilanich; Craig D Dodson; Michael D Leonard; Christopher S Jeffrey
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

2.  Chemical encoding of risk perception and predator detection among estuarine invertebrates.

Authors:  Remington X Poulin; Serge Lavoie; Katherine Siegel; David A Gaul; Marc J Weissburg; Julia Kubanek
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-08       Impact factor: 11.205

3.  Identification of new geldanamycin derivatives from unexplored microbial culture extracts using a MS/MS library.

Authors:  Jae Kyoung Lee; Jae-Hyuk Jang; Dong-Jin Park; Chang-Jin Kim; Jong Seog Ahn; Bang Yeon Hwang; Young-Soo Hong
Journal:  J Antibiot (Tokyo)       Date:  2016-12-21       Impact factor: 2.649

4.  Metabolomic study of volatile compounds emitted by lavender grown under open-field conditions: a potential approach to investigate the yellow decline disease.

Authors:  Émilie Stierlin; Florence Nicolè; Thomas Costes; Xavier Fernandez; Thomas Michel
Journal:  Metabolomics       Date:  2020-02-26       Impact factor: 4.290

Review 5.  Metabolomics and genomics in natural products research: complementary tools for targeting new chemical entities.

Authors:  Lindsay K Caesar; Rana Montaser; Nancy P Keller; Neil L Kelleher
Journal:  Nat Prod Rep       Date:  2021-11-17       Impact factor: 13.423

6.  The Identification of Sea Lamprey Pheromones Using Bioassay-Guided Fractionation.

Authors:  Anne M Scott; Ke Li; Weiming Li
Journal:  J Vis Exp       Date:  2018-07-17       Impact factor: 1.355

7.  Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds.

Authors:  Joshua J Kellogg; Daniel A Todd; Joseph M Egan; Huzefa A Raja; Nicholas H Oberlies; Olav M Kvalheim; Nadja B Cech
Journal:  J Nat Prod       Date:  2016-02-03       Impact factor: 4.050

8.  Two organobromines trigger lifespan, growth, reproductive and transcriptional changes in Caenorhabditis elegans.

Authors:  Nadine Saul; Nora Baberschke; Shumon Chakrabarti; Stephen R Stürzenbaum; Thora Lieke; Ralph Menzel; Adam Jonáš; Christian E W Steinberg
Journal:  Environ Sci Pollut Res Int       Date:  2014-05-17       Impact factor: 4.223

9.  The second skin: ecological role of epibiotic biofilms on marine organisms.

Authors:  Martin Wahl; Franz Goecke; Antje Labes; Sergey Dobretsov; Florian Weinberger
Journal:  Front Microbiol       Date:  2012-08-23       Impact factor: 5.640

Review 10.  Halogenated compounds from marine algae.

Authors:  Maria Teresa Cabrita; Carlos Vale; Amélia Pilar Rauter
Journal:  Mar Drugs       Date:  2010-08-09       Impact factor: 5.118

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