Literature DB >> 19807668

Cancer and virus leads by HTS, chemical design and SEA data mining.

Pahk Thepchatri1, Jaeki Min, Thota Ganesh, Yuhong Du, Iestyn Lewis, Serdar Kurtkaya, Andrew Prussia, Lian Li, Blossom Sneed, Richard K Plemper, Haian Fu, Dennis C Liotta, James P Snyder, Raymond Dingledine, Aiming Sun.   

Abstract

A variety of medicinal chemistry approaches can be used for the identification of hits, generation of leads and to accelerate the development of drug candidates. The Emory Chemical and Biology Discovery Center (ECBDC) has been an active participant in the NIH's high-throughput screening (HTS) endeavor to identify potent small molecule probes for poorly studied proteins. Several of Emory's projects relate to cancer or virus infection. We have chosen three successful examples including discovery of potent measles virus RNA-dependent RNA polymerase inhibitors, development of Heat Shock Protein 90 (Hsp90) blockers and identification of angiogenesis inhibitors using transgenic Zebrafish as a HTS model. In parallel with HTS, a unique component of the Emory virtual screening (VS) effort, namely, substructure enrichment analysis (SEA) program has been utilized in several cases.

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Year:  2009        PMID: 19807668      PMCID: PMC4442615          DOI: 10.2174/156802609789753581

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  49 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Bridging chemical and biological space: "target fishing" using 2D and 3D molecular descriptors.

Authors:  James H Nettles; Jeremy L Jenkins; Andreas Bender; Zhan Deng; John W Davies; Meir Glick
Journal:  J Med Chem       Date:  2006-11-16       Impact factor: 7.446

Review 3.  Development and application of Hsp90 inhibitors.

Authors:  David B Solit; Gabriela Chiosis
Journal:  Drug Discov Today       Date:  2007-11-26       Impact factor: 7.851

4.  Nonpeptide inhibitors of measles virus entry.

Authors:  Aiming Sun; Andrew Prussia; Weiqiang Zhan; Ernest E Murray; Joshua Doyle; Li-Ting Cheng; Jeong-Joong Yoon; Eugene V Radchenko; Vladimir A Palyulin; Richard W Compans; Dennis C Liotta; Richard K Plemper; James P Snyder
Journal:  J Med Chem       Date:  2006-08-24       Impact factor: 7.446

5.  Structural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors.

Authors:  Robert M Immormino; Yanlong Kang; Gabriela Chiosis; Daniel T Gewirth
Journal:  J Med Chem       Date:  2006-08-10       Impact factor: 7.446

6.  Indirubin, the active constituent of a Chinese antileukaemia medicine, inhibits cyclin-dependent kinases.

Authors:  R Hoessel; S Leclerc; J A Endicott; M E Nobel; A Lawrie; P Tunnah; M Leost; E Damiens; D Marie; D Marko; E Niederberger; W Tang; G Eisenbrand; L Meijer
Journal:  Nat Cell Biol       Date:  1999-05       Impact factor: 28.824

7.  Potent non-nucleoside inhibitors of the measles virus RNA-dependent RNA polymerase complex.

Authors:  Aiming Sun; Jeong-Joong Yoon; Yan Yin; Andrew Prussia; Yutao Yang; Jaeki Min; Richard K Plemper; James P Snyder
Journal:  J Med Chem       Date:  2008-06-05       Impact factor: 7.446

8.  Synthesis and antiviral evaluation of N-carboxamidine-substituted analogues of 1-beta-D-ribofuranosyl-1,2,4-triazole-3-carboxamidine hydrochloride.

Authors:  B Gabrielsen; M J Phelan; L Barthel-Rosa; C See; J W Huggins; D F Kefauver; T P Monath; M A Ussery; G N Chmurny; E M Schubert
Journal:  J Med Chem       Date:  1992-08-21       Impact factor: 7.446

9.  Automated, quantitative screening assay for antiangiogenic compounds using transgenic zebrafish.

Authors:  T Cameron Tran; Blossom Sneed; Jamil Haider; Delali Blavo; Audrey White; Temitope Aiyejorun; Timothy C Baranowski; Amy L Rubinstein; Thanh N Doan; Raymond Dingledine; Eric M Sandberg
Journal:  Cancer Res       Date:  2007-12-01       Impact factor: 12.701

10.  A fluorescence polarization assay for inhibitors of Hsp90.

Authors:  R Howes; X Barril; B W Dymock; K Grant; C J Northfield; A G S Robertson; A Surgenor; J Wayne; L Wright; K James; T Matthews; K-M Cheung; E McDonald; P Workman; M J Drysdale
Journal:  Anal Biochem       Date:  2006-01-23       Impact factor: 3.365

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